Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0145 ATGGTTGTTCTTGCAGCTTCTATTGTAAGCAAGTCTGGGAAAGTGCTCGTTTCTAGGCAATTTGTGGATATGACTCGTATAAGAATTGAGGCTCTTCTTGCTGCTTTTCCCAAGTTGGTAGGCACAGGGAAACAACATACTTATGTTGAGACTGAAAATGTGCGGTATGTTTACCAGCCAATTGAGGCATTGTACCTGCTATTAGTAACTAATAAACAGAGCAACATTCTTGAAGACTTGGAAACTCTGAGGCTGCTTTCAAAGCTTGTTCCTGAATATTCTGTCTCTCTGGATGAGGAGGGTGTTTGCAAGACAGCTTTTGAGCTCATTTTTGCATTTGATGAGGTCATCTCCCTTGGGCACAAGGAAAATGTGACTGTTGCACAAGTTAAGCAGTACTGTGAGATGGAGAGTCACGAAGAGAAGCTGCACAAGCTGGTATTGCAGAGCAAGATAAATGAGACAAAGGATGTGATGAAGCGCAAAGCTAGTGAGATAGACAAAAGCAAGATTGAAAAGAATAGAGGTGAGAAAGGAGGTTTTATGTCTTTACAGTCGATGGGTTCTGGAAGAATTGAGAGTACCTTTAATGATATGAGTATATCTAGCAGTGGTGGTGGTGGTTTTGGAAGTGGCTCTGGGTTTGGATTGACCACTGATATCGACTCCTTCTCTACCAAGTCCAAAGGTCGTCCATCTTCATCTGCCACTGCTCCTCCTAAAGGCCTTGGTATGCAGCTTAACAAGACACAAAAGGCAAACCAGTTCTTGGAATCTTTGAAGGCTGAAGGCGAAGTGATTCTTGAGGATGTGCACCCCAAAGCTGGTCCAACCAGGTCAGCCGCACCACCACTAACTGACCCCATTACATTGAGTGCTGAAGAGAGACTTAATGTGACGCTAAAGCGCGATGGTGGAGTGAGCAACTTCGATGTTCAGGGAACATTGTCACTTCAAATCCTTAACCAGGAAGATGGATTAATCCAAGTTCAGATCGAGACTGGGAGCAATCCAGGCATCCTTTTCAAAACTCATCCTAACATCAACAAAGAACTATTTTCGAATGAAAATATTCTAGGCCTGAAGGATCCAAATAGGCCATTTCCCACTGGTCAAGGAGGTGATGCGGCAGGTGTCGGTCTTTTGAAGTGGAGAATGCAAAGTGTGGATGAGTCAGATGTGCCACTAACAATTAACTGCTGGCCATCTGTTTCTGGAAATGAAACTTATGTCAGCATTGAATACGAAGCTTCATCAATGTTTGATCTGCGAAATGTTGTGATCTCGGTTCCTCTTCCAGCTCTTCGTGAGGCACCTAATGTGAGGCAAATTGATGGGGAATGGAGGTACGACTCCAGAAATTCTATCTTGGAGTGGTCCATACTTCTCATTGATAACTCAAATCGCAGTGGATCAATGGAGTTTGTTGTTCCTCCAGCAGATTCGTCAGTTTTCTTTCCCATTTCTGTTCGGTTTACTGCTGCAAAGACATTCAGTGACCTAAAGGTTGTTAATGTTTTACCGCTGAGAGGTGGCCCGCCTCCGAAGTTTTCTCAGAGAACCACTCTAATCACGGAGAACTATCAAGTGGTGTAA 1596 0.4386 MVVLAASIVSKSGKVLVSRQFVDMTRIRIEALLAAFPKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSVSLDEEGVCKTAFELIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKINETKDVMKRKASEIDKSKIEKNRGEKGGFMSLQSMGSGRIESTFNDMSISSSGGGGFGSGSGFGLTTDIDSFSTKSKGRPSSSATAPPKGLGMQLNKTQKANQFLESLKAEGEVILEDVHPKAGPTRSAAPPLTDPITLSAEERLNVTLKRDGGVSNFDVQGTLSLQILNQEDGLIQVQIETGSNPGILFKTHPNINKELFSNENILGLKDPNRPFPTGQGGDAAGVGLLKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0145 531 Gene3D Mu homology domain, subdomain B 396 493 - -
Vvi1g0145 531 FunFam Coatomer subunit delta 398 493 - -
Vvi1g0145 531 MobiDBLite consensus disorder prediction 222 241 - -
Vvi1g0145 531 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 288 530 IPR036168 -
Vvi1g0145 531 Pfam Adaptor complexes medium subunit family 286 505 IPR028565 -
Vvi1g0145 531 CDD AP_delta-COPI_MHD 287 528 - -
Vvi1g0145 531 MobiDBLite consensus disorder prediction 222 246 - -
Vvi1g0145 531 CDD Delta_COP_N 4 133 - -
Vvi1g0145 531 SUPERFAMILY SNARE-like 5 142 IPR011012 -
Vvi1g0145 531 Gene3D Mu homology domain, subdomain B 290 505 - -
Vvi1g0145 531 FunFam Coatomer subunit delta 289 397 - -
Vvi1g0145 531 ProSiteProfiles Mu homology domain (MHD) profile. 286 531 IPR028565 -
Vvi1g0145 531 Gene3D - 3 141 - -
Vvi1g0145 531 PANTHER COATOMER SUBUNIT DELTA 1 531 IPR027059 GO:0006890|GO:0030126
Vvi1g0145 531 FunFam Coatomer subunit delta 3 141 - -