Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0134 ATGTTGGGTTTAGCCACCACTGCTACCGCTACCACCGCCACCGCAGCTCCGACCACCGCTGCGAAGAATCGCGTTCTCTGCAGCTCAGGAAGACTTCAGCGGTGGTTTCAGCGTTCTTCGGTCGCGTGCTATCGCATTTCTTCTCCATCGCTGCGGTCTAATTTCTGCGCAGTCAAGGCTATGGCGGAGGCGGACACCATTTCGATTCTGAAGGCTCAGTCTCAGTCCAATGCTTCGGGCAACAAGCAAGCTTTGATTTCGTTGTCCGACAAAAAGGATCTAGCTTTCCTTGGAAATGGCCTCCAAAGTTTAGGATATACAATTGTTTCAACTGGAGGAACAGCATCAGCTTTGGAAAATGCAGGGGTCTCTGTAACTAAAGTGGAACAGCTTACCTGTTTTCCAGAAATGCTTGATGGCCGTGTGAAAACTTTACATCCAAACATACATGGGGGTATTCTTGCTAGAAGAGACCAAAAGCTTCACATGGAAGCTCTTAATGAGCATGGAATTGGTACTTTTGACGTGGTGGTGGTGAACTTGTATCCATTTTATGATAAAGTTTCTTCTGGAGGAATTGAATTTGAAGATGGAATTGAGAACATTGATATTGGTGGCCCAGCCATGATCAGAGCGGCTGCAAAGAATCACAAGGATGTTTTGGTTGTTGTTGATTCACAAGATTATTCCGCACTCCTAGAATTTCTCCAAGGGAACCAGGATGACCAACTGTTCCGAAGAAAGCTTGCTTGGAAGGCTTTCCAACATGTTGCTTCTTATGATTCTGCAGTTTCAGAGTGGCTGTGGAAGCAGACTGTAGGAGACAAATTTCCTCCCAGTCTGACAGTTCCTCTCTCACTCAAAAGTTCTCTTCGTTATGGTGAAAACCCTCATCAAAAGGCTGCATTTTATGTTGACAAGAGTCTTTCTGAGGTTAATGCTGGTGGTATTGCTACTGCCATTCAACACCATGGAAAGGAGATGTCATATAATAACTATTTAGACGCTGATGCAGCTTGGAACTGTGTGTCAGAATTTAAGAACCCTACATGTGTGATAGTAAAGCATACAAATCCCTGTGGAGTAGCTTCACGTGATGACATCCTTGAAGCTTATAGATTAGCTGTGAAAGCAGATCCAGTGAGTGCATTTGGTGGTATCGTAGCCTTCAACATAGAAGTTGATGAGGCACTTGCAAAAGAAATCCGTGAGTTTAGGAGTCCAACTGATGGTGAAACACGGATGTTTTATGAGATTGTGGTTGCACCCAAGTATTCACAAAAGGGACTTGACATCCTCCGTGGAAAATCAAAAACTTTAAGAATTTTGGAAGCAGGCAAGAACGAGAAAGGAAAGCTTTCACTTCGACAAGTTGGTGGGGGTTGGTTAGCGCAGGATTCAGATGATTTAACCCCAGAAGATATCCCATTCAAATTAGTTTCTGAGAAGGCTCCTCCGGAAAGTGAGCTTCGCGATGCTGAGTTTGCATGGTTGTGTGTCAAGCATGTCAAGAGCAATGCCATTGTAATAGCAAAGAATAACTGCATGTTGGGTATGGGGAGTGGGCAGCCAAACCGCCGGGAGAGTTTGAGAATTGCAGTGAGGAAAGCTGGGGATGAGGTCAAAGGAGCTGCTTTGGCCAGTGATGCTTTCTTCCCATTTGCTTGGAAAGATGCGGTGGAAGAAGCATGCGAGAGTGGGATTGGTATCATTGCAGAGCCCGGAGGGAGCATCAGAGATGGAGATGCCATAGACTGCTGTAACAAATACGGGGTATCACTTCTTTTCACCAATGTGAGGCACTTCAGGCATTAA 1815 0.4534 MLGLATTATATTATAAPTTAAKNRVLCSSGRLQRWFQRSSVACYRISSPSLRSNFCAVKAMAEADTISILKAQSQSNASGNKQALISLSDKKDLAFLGNGLQSLGYTIVSTGGTASALENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKLHMEALNEHGIGTFDVVVVNLYPFYDKVSSGGIEFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSQDYSALLEFLQGNQDDQLFRRKLAWKAFQHVASYDSAVSEWLWKQTVGDKFPPSLTVPLSLKSSLRYGENPHQKAAFYVDKSLSEVNAGGIATAIQHHGKEMSYNNYLDADAAWNCVSEFKNPTCVIVKHTNPCGVASRDDILEAYRLAVKADPVSAFGGIVAFNIEVDEALAKEIREFRSPTDGETRMFYEIVVAPKYSQKGLDILRGKSKTLRILEAGKNEKGKLSLRQVGGGWLAQDSDDLTPEDIPFKLVSEKAPPESELRDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAVRKAGDEVKGAALASDAFFPFAWKDAVEEACESGIGIIAEPGGSIRDGDAIDCCNKYGVSLLFTNVRHFRH* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0134 604 Hamap Bifunctional purine biosynthesis protein PurH [purH]. 81 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g0134 604 SMART MGS_2a 93 208 IPR011607 -
Vvi1g0134 604 SUPERFAMILY Cytidine deaminase-like 288 604 IPR016193 GO:0003824
Vvi1g0134 604 Gene3D - 471 604 IPR024051 -
Vvi1g0134 604 FunFam Bifunctional purine biosynthesis protein PurH 471 604 - -
Vvi1g0134 604 FunFam Bifunctional purine biosynthesis protein PurH 75 274 - -
Vvi1g0134 604 PANTHER BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH 79 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g0134 604 CDD IMPCH 82 268 - -
Vvi1g0134 604 ProSiteProfiles MGS-like domain profile. 73 224 IPR011607 -
Vvi1g0134 604 Gene3D - 285 451 IPR024051 -
Vvi1g0134 604 SUPERFAMILY Methylglyoxal synthase-like 82 271 IPR036914 -
Vvi1g0134 604 Gene3D - 73 275 IPR036914 -
Vvi1g0134 604 Pfam MGS-like domain 98 207 IPR011607 -
Vvi1g0134 604 Pfam AICARFT/IMPCHase bienzyme 213 536 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g0134 604 SMART aicarft_impchas 213 537 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g0134 604 PIRSF PurH 75 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g0134 604 FunFam Bifunctional purine biosynthesis protein PurH 283 450 - -
Vvi1g0134 604 NCBIfam bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 82 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0134 Vvi-Chr1 1248360 1254947 Dispersed