Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g0133 | ATGAGCTTGATTACGAGATCATCAAGGCACCATTTTCTCTCCACTTTCTGTAGAAACTCAGCGATTTTCTCGAGAAAACTGAGCCAGGCCGCTGCCAACAAGGTCGACGATGAGTCCGAAGAAGAAGTAGAAATCGACCAAAGAAGGCTTCCAGCGGATTACGACCCGGCAAACTTCGACCCCACCCAGCACCGGAGCCCACCCACCGCCAGAGTCTTCAGGCTCGTTGACGAAATCGCCGGGCTCACGCTCGTCGAAGTGGCTGAGCTCTCCTCGATTCTAAGGAAGAAGCTGGGCATGAAGGAACCCCCAGTTGTTGCGATCATGAAACCTGGGGCGGTGGCTGCTGTTTCAGGCGGGGGAATGAAGGCGGCGTCGGCGGCCAAAGAGGAGAAGAAGCCGGAGAAGACTGTGTTCGAACTGAAGCTTGAATCATATGAGGCGGCTTCGAAGATCAAGATAATTAAGGAGGTTAGAAGTTTTACTGATTTGGGTCTCAAAGAAGCCAAGGATTTAGTGGAGAAGGCGCCGTCTGTACTGAAGGCTGGAGTGTCCAAGGAAGAGGGTGAGCAACTTGTGGAAAAATTAAAGGCTCTGGGTGCCAAAGTCGTTCTGGAATGA | 621 | 0.5217 | MSLITRSSRHHFLSTFCRNSAIFSRKLSQAAANKVDDESEEEVEIDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKLGMKEPPVVAIMKPGAVAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE* | 207 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g0133 | 206 | PANTHER | 39S RIBOSOMAL PROTEIN L12 | 32 | 206 | IPR000206 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0133 | 206 | CDD | Ribosomal_L7_L12 | 70 | 205 | IPR000206 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0133 | 206 | SUPERFAMILY | Ribosomal protein L7/12, oligomerisation (N-terminal) domain | 74 | 115 | IPR036235 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0133 | 206 | Pfam | Ribosomal protein L7/L12 C-terminal domain | 139 | 205 | IPR013823 | GO:0003735|GO:0006412 | |
Vvi1g0133 | 206 | Hamap | 50S ribosomal protein L7/L12 [rplL]. | 69 | 206 | IPR000206 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0133 | 206 | Pfam | Ribosomal protein L7/L12 dimerisation domain | 75 | 116 | IPR008932 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0133 | 206 | Gene3D | - | 136 | 205 | IPR014719 | - | |
Vvi1g0133 | 206 | FunFam | 50S ribosomal protein L7/L12 | 135 | 206 | - | - | |
Vvi1g0133 | 206 | Gene3D | Single helix bin | 73 | 135 | IPR036235 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0133 | 206 | SUPERFAMILY | ClpS-like | 135 | 205 | IPR014719 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi1g0133 | Vvi-Chr1 | 1245323 | 1245943 | Dispersed |