Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0133 ATGAGCTTGATTACGAGATCATCAAGGCACCATTTTCTCTCCACTTTCTGTAGAAACTCAGCGATTTTCTCGAGAAAACTGAGCCAGGCCGCTGCCAACAAGGTCGACGATGAGTCCGAAGAAGAAGTAGAAATCGACCAAAGAAGGCTTCCAGCGGATTACGACCCGGCAAACTTCGACCCCACCCAGCACCGGAGCCCACCCACCGCCAGAGTCTTCAGGCTCGTTGACGAAATCGCCGGGCTCACGCTCGTCGAAGTGGCTGAGCTCTCCTCGATTCTAAGGAAGAAGCTGGGCATGAAGGAACCCCCAGTTGTTGCGATCATGAAACCTGGGGCGGTGGCTGCTGTTTCAGGCGGGGGAATGAAGGCGGCGTCGGCGGCCAAAGAGGAGAAGAAGCCGGAGAAGACTGTGTTCGAACTGAAGCTTGAATCATATGAGGCGGCTTCGAAGATCAAGATAATTAAGGAGGTTAGAAGTTTTACTGATTTGGGTCTCAAAGAAGCCAAGGATTTAGTGGAGAAGGCGCCGTCTGTACTGAAGGCTGGAGTGTCCAAGGAAGAGGGTGAGCAACTTGTGGAAAAATTAAAGGCTCTGGGTGCCAAAGTCGTTCTGGAATGA 621 0.5217 MSLITRSSRHHFLSTFCRNSAIFSRKLSQAAANKVDDESEEEVEIDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKLGMKEPPVVAIMKPGAVAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE* 207
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0133 206 PANTHER 39S RIBOSOMAL PROTEIN L12 32 206 IPR000206 GO:0003735|GO:0005840|GO:0006412
Vvi1g0133 206 CDD Ribosomal_L7_L12 70 205 IPR000206 GO:0003735|GO:0005840|GO:0006412
Vvi1g0133 206 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 74 115 IPR036235 GO:0003735|GO:0005840|GO:0006412
Vvi1g0133 206 Pfam Ribosomal protein L7/L12 C-terminal domain 139 205 IPR013823 GO:0003735|GO:0006412
Vvi1g0133 206 Hamap 50S ribosomal protein L7/L12 [rplL]. 69 206 IPR000206 GO:0003735|GO:0005840|GO:0006412
Vvi1g0133 206 Pfam Ribosomal protein L7/L12 dimerisation domain 75 116 IPR008932 GO:0003735|GO:0005840|GO:0006412
Vvi1g0133 206 Gene3D - 136 205 IPR014719 -
Vvi1g0133 206 FunFam 50S ribosomal protein L7/L12 135 206 - -
Vvi1g0133 206 Gene3D Single helix bin 73 135 IPR036235 GO:0003735|GO:0005840|GO:0006412
Vvi1g0133 206 SUPERFAMILY ClpS-like 135 205 IPR014719 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0133 Vvi-Chr1 1245323 1245943 Dispersed