Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0110 ATGGATGCTTTTAACACTCCCATAACCTTGCCCATGTCTTACTCTTTCACTAGTAGTGGTGGTAGTACCAGTAGTGGTACTGCTGCCAATACAAATATTAATCCCTGGATGGACAGTAGGATATGGAGTAAGCTCCCACAGAGGCTGATCGATCGGGTGATTGCCTTCCTCCCACCTCCAGACTTTTTTCGAGCCAGAGCAGTGTGTAAGAGATGGTATGGACTCTTATTTTCCAGCAGCTTTCTTGAATTGTATCTGCAAATATCCCCACGCCGCCATTGGTTCCTGTTCTTCAAGCACAAAAGCCTCAAGAGCTACATCTATAGGAACAGTGGTGGTGGCAGTGATAGAGCCAATTGTGAAGGATACCTCTTTGATCCTTACTCCAATTCATGGTATCGTCTTTCCTTCTCTCTGATCCCATCTGGGTTCTCTCCAGCTTCTTCCTCTGGTGGCTTAATCTGTTGGGTCTCTGATGAGGCCGGTCCCAAGGGTCTATTCCTCTGCAACCCACTTGTTGGGTCTCTATCCCAATTGCCTCCCACCCTGAGACCCCGTCTCTTCCCGTCCATCGGCTTAACAGTCACTCCCTCATCCATAGACGTAGCTGTTGCTGGAGATGACTTGATTTCTCCATATGCGGTCAAGAATCTGACCACAGAAAGCTTTCACATTGATGGGGGTGGGTTCTATTCAATATGGGGCACCACTTCTTCTCTACCAAGGCTCTGCAGCCTCGAATCCGGGCGAATGGTTCACGTCCAAGGGAGATTCTACTGCATGAACTACAGCCCATTCAGTGTTTTGGCATATGACATAGCAGCCAACAATTGGTGGAAGATTCAAGCTCCAATGAGAAGATTTCTCCGGTCCCCAAGCTTGGTGGAGAGCAGAGGGAGACTCATTCTAGTTGCAACAGTGGAGAAGAGCAAGCTTAACGTGCCAAAAAGCTTGAGGATTTGGGGTTTGCAAGCTTGTGGAACAACATGGGTGGAGATTGAGAGAATGCCACAGCAACTCTACCTTCAATTTGCAGAGGTTGAAGGCAGCCAAGGGTTTGACTGTGTAGGTCATGGAGAGTTCATTGCCATTATGATTCGAGGTTCAGACAAGGCATTGCTGTTTAACATCTATGGAAAGACCTGGCAATGGATTCCTCCATGTCCTTTCCTTAGTGGGAGCGGCGGCAGCAGCAGTAGCAGTGGAGAAGGTTGTGAGTTGCACGGCTTTGCATATGAGCCTAGGCTTGCCACGCCAGTGACCACCCTCCTTGATCAGCTCACACTTCCCTTTCAGCCTTTTAATGGATAG 1311 0.4859 MDAFNTPITLPMSYSFTSSGGSTSSGTAANTNINPWMDSRIWSKLPQRLIDRVIAFLPPPDFFRARAVCKRWYGLLFSSSFLELYLQISPRRHWFLFFKHKSLKSYIYRNSGGGSDRANCEGYLFDPYSNSWYRLSFSLIPSGFSPASSSGGLICWVSDEAGPKGLFLCNPLVGSLSQLPPTLRPRLFPSIGLTVTPSSIDVAVAGDDLISPYAVKNLTTESFHIDGGGFYSIWGTTSSLPRLCSLESGRMVHVQGRFYCMNYSPFSVLAYDIAANNWWKIQAPMRRFLRSPSLVESRGRLILVATVEKSKLNVPKSLRIWGLQACGTTWVEIERMPQQLYLQFAEVEGSQGFDCVGHGEFIAIMIRGSDKALLFNIYGKTWQWIPPCPFLSGSGGSSSSSGEGCELHGFAYEPRLATPVTTLLDQLTLPFQPFNG* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0110 436 ProSiteProfiles F-box domain profile. 39 88 IPR001810 GO:0005515
Vvi1g0110 436 Pfam F-box domain 42 76 IPR001810 GO:0005515
Vvi1g0110 436 FunFam protein UNUSUAL FLORAL ORGANS 38 82 - -
Vvi1g0110 436 Gene3D - 42 81 - -
Vvi1g0110 436 SUPERFAMILY F-box domain 33 112 IPR036047 GO:0005515
Vvi1g0110 436 Gene3D - 97 399 IPR015915 GO:0005515
Vvi1g0110 436 PANTHER BNACNNG10540D PROTEIN 22 418 - -
Vvi1g0110 436 SUPERFAMILY Galactose oxidase, central domain 88 400 IPR011043 -
Vvi1g0110 436 SMART fbox_2 45 85 IPR001810 GO:0005515