Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g0104 | ATGTCAATGTTATCAAAATTACGCTGTATCACCTTCGATGTCACGGGTACACTCATAGCTTACAAAGGTGAGCTTGGTGATTACTATTGCATGGCAGCCAAATCTATTGGATTGCCATGTCCTGACTACAAAAGGGTCCACGAGGGCTTCAAACTTGCATACACAGAGATGGCAAAGAAGTATCCATGTTTTGGATATGCAGCAAAAATGCCTAACATTGTGTGGTGGAAAACTTGTGTTAGAGACTCTTTCGTCAGGGCAGGATATGATTACGATGAGGAGACATTTGAGAAGGTGTTCAGACGTATATACTCAACATTTGGTTCATCTGCACCATATACCATCTTCCCCGACTCCCAACCATTTCTCAGATGGGTACATGAAAAGGGTCTTAAAGTTGGGATCATTAGCAATGCAGAGTATCGGTATAAAGATGTCATCCTTCCTGCCTTGGGTTTGAACCAGGGAACCGAATGGGATTTTGGCGTGTTCTCTGGTCTTGAAGGTGTAGAGAAACCAAACCCCAGGATTTATGAGATTGCCCTTGAAAGGGCTGGAAACATTGCACCAGAAGAAGTGTTGCACATTGGTGACAGCATGCGCAAAGACTATTTGCCGGCGAAGGGTGTGGGGATGCATGCACTTCTGTTGGACAGATTTAAGACCCCCGACGCCATTGAGTGGTCCAAATCTGGCGCAACTGTGCTTCCTGATTTGGTGTCGGTGCAGGAATGGCTCACTTCACAGAACTAA | 753 | 0.4542 | MSMLSKLRCITFDVTGTLIAYKGELGDYYCMAAKSIGLPCPDYKRVHEGFKLAYTEMAKKYPCFGYAAKMPNIVWWKTCVRDSFVRAGYDYDEETFEKVFRRIYSTFGSSAPYTIFPDSQPFLRWVHEKGLKVGIISNAEYRYKDVILPALGLNQGTEWDFGVFSGLEGVEKPNPRIYEIALERAGNIAPEEVLHIGDSMRKDYLPAKGVGMHALLLDRFKTPDAIEWSKSGATVLPDLVSVQEWLTSQN* | 251 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g0104 | 250 | Gene3D | - | 10 | 221 | IPR023214 | - | |
| Vvi1g0104 | 250 | SFLD | Haloacid Dehalogenase | 7 | 247 | - | - | |
| Vvi1g0104 | 250 | Pfam | haloacid dehalogenase-like hydrolase | 8 | 208 | - | - | |
| Vvi1g0104 | 250 | PANTHER | OS02G0173600 PROTEIN | 1 | 250 | - | - | |
| Vvi1g0104 | 250 | NCBIfam | HAD hydrolase, REG-2-like, family IA | 8 | 216 | IPR011949 | - | |
| Vvi1g0104 | 250 | SFLD | C1.5: HAD, Beta-PGM, Phosphatase Like | 7 | 247 | - | - | |
| Vvi1g0104 | 250 | NCBIfam | HAD-IA family hydrolase | 129 | 211 | IPR006439 | - | |
| Vvi1g0104 | 250 | SUPERFAMILY | HAD-like | 7 | 246 | IPR036412 | - | |
| Vvi1g0104 | 250 | CDD | HAD_dREG-2_like | 114 | 244 | - | - | |
| Vvi1g0104 | 250 | Gene3D | - | 23 | 108 | IPR044924 | - | |
| Vvi1g0104 | 250 | PRINTS | Haloacid dehalogenase/epoxide hydrolase family signature | 159 | 175 | IPR006439 | - | |
| Vvi1g0104 | 250 | PRINTS | Haloacid dehalogenase/epoxide hydrolase family signature | 206 | 219 | IPR006439 | - | |
| Vvi1g0104 | 250 | PRINTS | Haloacid dehalogenase/epoxide hydrolase family signature | 7 | 18 | IPR006439 | - | |
| Vvi1g0104 | 250 | PRINTS | Haloacid dehalogenase/epoxide hydrolase family signature | 126 | 139 | IPR006439 | - |