Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0090 ATGTCAAGCAGCAAGGCAAAGCTGTCTGGGATGGAGTTATGTGCAGCCTTTGATGTTTCACGTGGTCCGGCTAATGCTTCCTGGAAGAATTTGATTCATGCACCCCCAAGACATGACGTGCTGTACCTAGCCTTCAAAAGATACAAAATCACTTCAGATGAAGACAATGAAATGTTTGTTTTGCACACCGACCCCGCCGACGGTCCCCAGCCCATGGAAGTGGCGCGATCAGATACTGCTAGTATAGTGGATGCGCAGACTGTAGAAGATCCCTTGTCGACCAGGTTTGCGTTGACAATTGAGAACTTTTCTGGATTGAATATCCGGAAGCTCTACTCGGACGTGTTCCATATTGGAGGCTGCAAATGGAGGGTTCTTGATTTTCTCAAGGGGAACAACGTGGATCCATCATTGGTCTGA 420 0.4786 MSSSKAKLSGMELCAAFDVSRGPANASWKNLIHAPPRHDVLYLAFKRYKITSDEDNEMFVLHTDPADGPQPMEVARSDTASIVDAQTVEDPLSTRFALTIENFSGLNIRKLYSDVFHIGGCKWRVLDFLKGNNVDPSLV* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0090 139 CDD MATH 95 135 IPR002083 GO:0005515
Vvi1g0090 139 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 81 137 IPR008974 GO:0005515
Vvi1g0090 139 ProSiteProfiles MATH/TRAF domain profile. 93 139 IPR002083 GO:0005515
Vvi1g0090 139 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 90 135 - -
Vvi1g0090 139 SUPERFAMILY TRAF domain-like 91 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0090 Vvi-Chr1 908789 909533 Dispersed