Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g0071 | ATGTTATCGGAAGCTGATCCATCAGTAAGTGGAATAAACAGCGTTGATGAAGAAGGTTGGGCGCCACTCCACTCTGCTGCAAGCAGTGGGCATACAGAAATTGTGGAGATTTTGATTAGCAGAGGGGCTGATGTTAATTTGAAAAATGATGGAGGTCGCACTGCTCTTCACTATGCTGCCAGCAAAGGATGGTTGAAAATTGCTGAATTTCTGATTTTACACAATGCAAAGATTAATGCCAAGGATAAGATCGGTTGCACCCCATTGCATCGAGCAGCAAGCACAGGGAACTCAGCAATGTGTGAACTCTTAATTGAGGAAGGAGCAGAAGTTGATGCTATTGATAAAGCTGGTCAAACTCCTCTTATGAATGCAGTAATATGCCAAAACAAAGAGGTGGCTCTCCTTCTGATAAGACATGGTGCAGATGTGGATGTAGAAGACAAGGAAGGATACACTGTACTTGGACGAACTTCAGATGATTTTAGACCAATACTGGTAGATGCTGCGAAGGCCATGCTTGAAGGATGA | 531 | 0.435 | MLSEADPSVSGINSVDEEGWAPLHSAASSGHTEIVEILISRGADVNLKNDGGRTALHYAASKGWLKIAEFLILHNAKINAKDKIGCTPLHRAASTGNSAMCELLIEEGAEVDAIDKAGQTPLMNAVICQNKEVALLLIRHGADVDVEDKEGYTVLGRTSDDFRPILVDAAKAMLEG* | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g0071 | 176 | SUPERFAMILY | Ankyrin repeat | 12 | 155 | IPR036770 | - | |
| Vvi1g0071 | 176 | PRINTS | Ankyrin repeat signature | 19 | 34 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | PRINTS | Ankyrin repeat signature | 133 | 147 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat region circular profile. | 18 | 50 | - | - | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat profile. | 117 | 149 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat region circular profile. | 84 | 116 | - | - | |
| Vvi1g0071 | 176 | PANTHER | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60 | 13 | 97 | IPR039323 | - | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat profile. | 51 | 83 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat profile. | 84 | 116 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat region circular profile. | 117 | 149 | - | - | |
| Vvi1g0071 | 176 | Gene3D | - | 2 | 55 | IPR036770 | - | |
| Vvi1g0071 | 176 | SMART | ANK_2a | 117 | 146 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | SMART | ANK_2a | 84 | 113 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | SMART | ANK_2a | 51 | 80 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | SMART | ANK_2a | 18 | 47 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat region circular profile. | 51 | 83 | - | - | |
| Vvi1g0071 | 176 | Pfam | Ankyrin repeats (3 copies) | 13 | 82 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | Pfam | Ankyrin repeats (3 copies) | 85 | 148 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | ProSiteProfiles | Ankyrin repeat profile. | 18 | 50 | IPR002110 | GO:0005515 | |
| Vvi1g0071 | 176 | Gene3D | - | 56 | 175 | IPR036770 | - |