Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0067 ATGGGGAAGGTGTCAGCCATCTTAGTGGGGCTTCTGCTCTTATGCGTATTGGGTGAAGCGGTACAGAATCTAGAGATATACAAAGACCCAACACAGCCCATTTATATGAGAATCAAAGACCTGATGGGAAGGATGAGTCTAGCAGAGAAAATAGGCCAAATGACGCAGATTGATCGATCAGTTGCTACCCCAGAGATCATGAAGGAATTCTCAATCGGCAGTTTACTTAGCGGCGGAGGCAGTGTGCCTCTACCTCAAGCCACCGCAGAAGACTGGATTCACATGGTGAACGACTTTCAAAAGGGCTCTCTTTCAAGCCGTCTGGGTATTCCAATGATTTATGGTATAGACGCTGTTCATGGCCATAACAGCGTATACAAGGCAACCATATTTCCCCACAATGTGGGTCTTGGGGCTACCAGGGATCCAGAGCTTGTGAAGAGGATTGGCGCTGCGACTGCCCTTGAAGTTAGAGCTACTGGCATTCAATATGCTTTTGCGCCATGTATTGCGGTCTGCAGAGATCCAAGATGGGGCCGGTGCTACGAGAGCTACAGTGAGGATCCCAAAATTGTCAAAGCAATGACAACAATTATAACTGGGCTACAAGGCGAGATCCCCACCAATTCAAGGGCGGGCATGCCTTATGTTGGTGGAAAGAATAAGGTAGCGGCTTGCGCAAAGCACTTTGTGGGTGATGGGGGCACGACTCATGGCATCAATGAGAACAACACCGTTATTGATTGGAAAGGATTAATGAAGATTCACATGCCTGCCTATCACCCTTCCATCGGGAGGGGTGTGGCTACAGTCATGGTTTCCTACTCCAGCTGGAATGGAAAGAAGATGCATGCTAACCACCAACTTATCACTGGATTCCTCAAAAACAACCTTAAATTCAAGGGTTTTGTCATCTCGGATTGGGAGGGTATTGACAGGATCACCTCACCACCCCATGCAAACTACACATATTCCGTTCAAGCTGGGATACAAGCAGGCATTGACATGGTAATGGTTCCTTTTAACCACATTGAATTCATTGGTATTCTGACCAAACTGGTGGAGAGCAAAGTCATCCCCATGAGCCGTATCGATGATGCTGTCAGCAGGATTTTGAGAGTCAAGTTTACCATGGGTTTGTTTGAGAACCCATTGGCTGATCTCAGTTTAGTTGACCAGCTAGGGAGCCAGGCTCATAGAGATTTGGCAAGAGAAGCAGTTAGGAAGTCTATGGTTCTTTTGAAGAATGGAGAAACCGCAGATGCTCCTTTGCTTCCCTTCCCTAAAAAGGCAGACAGGATCCTAGTTGCGGGAACCCACGCCGACAATTTGGGCTACCAATGTGGTGGTTGGACTATCACTTGGCAGGGACTTGATGGAAACAACCACACCCAAGGAACAACCATCCTAAGCGCCATCTCAGCTGCCATTGACCCAAGCACAGAACTGGTATATAGGGAGAATCCTGATGCTGAATTCGTCAAGTCCGGCAACTTCTCCTACGCGATCGTCGTTGTGGGAGAGCACCCTTATGCAGAGACTGCAGGAGATAATTCCAACTTAACAATTCCTGAACCAGGTCCTAGCACAATCACTAACGTATGTGGGGGCATTAAGTGTGTAGTTGTAGTGATCTCAGGCCGGCCTCTGGTGATCCAGCCCTACCTTCCATCCATAAGTGCTCTTGTTGCTGCATGGCTACCAGGCAGTGAAGGCCAAGGTGTGGCTGATGTTCTATTTGGAGACTATGGATTCACCGGGAAGCTTCCTCGGACGTGGTTCAAGACTGTAGAGCAACTGCCTATGAATTTTGACGATGCCTATTATGACCCACTCTTCCCCCTTGGCTTTGGACTCACGACCGAGCCAGCTGCGGCAAGATAG 1884 0.4846 MGKVSAILVGLLLLCVLGEAVQNLEIYKDPTQPIYMRIKDLMGRMSLAEKIGQMTQIDRSVATPEIMKEFSIGSLLSGGGSVPLPQATAEDWIHMVNDFQKGSLSSRLGIPMIYGIDAVHGHNSVYKATIFPHNVGLGATRDPELVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDPKIVKAMTTIITGLQGEIPTNSRAGMPYVGGKNKVAACAKHFVGDGGTTHGINENNTVIDWKGLMKIHMPAYHPSIGRGVATVMVSYSSWNGKKMHANHQLITGFLKNNLKFKGFVISDWEGIDRITSPPHANYTYSVQAGIQAGIDMVMVPFNHIEFIGILTKLVESKVIPMSRIDDAVSRILRVKFTMGLFENPLADLSLVDQLGSQAHRDLAREAVRKSMVLLKNGETADAPLLPFPKKADRILVAGTHADNLGYQCGGWTITWQGLDGNNHTQGTTILSAISAAIDPSTELVYRENPDAEFVKSGNFSYAIVVVGEHPYAETAGDNSNLTIPEPGPSTITNVCGGIKCVVVVISGRPLVIQPYLPSISALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKTVEQLPMNFDDAYYDPLFPLGFGLTTEPAAAR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0067 627 Pfam Glycosyl hydrolase family 3 C-terminal domain 411 620 IPR002772 GO:0004553|GO:0005975
Vvi1g0067 627 Gene3D - 20 395 IPR036962 GO:0004553|GO:0005975
Vvi1g0067 627 PRINTS Glycosyl hydrolase family 3 signature 223 239 IPR001764 GO:0004553|GO:0005975
Vvi1g0067 627 PRINTS Glycosyl hydrolase family 3 signature 107 123 IPR001764 GO:0004553|GO:0005975
Vvi1g0067 627 PRINTS Glycosyl hydrolase family 3 signature 131 150 IPR001764 GO:0004553|GO:0005975
Vvi1g0067 627 PRINTS Glycosyl hydrolase family 3 signature 177 193 IPR001764 GO:0004553|GO:0005975
Vvi1g0067 627 PRINTS Glycosyl hydrolase family 3 signature 293 311 IPR001764 GO:0004553|GO:0005975
Vvi1g0067 627 FunFam Glycosyl hydrolase family protein 396 622 - -
Vvi1g0067 627 SUPERFAMILY (Trans)glycosidases 25 410 IPR017853 -
Vvi1g0067 627 Gene3D - 396 622 IPR036881 GO:0004553|GO:0005975
Vvi1g0067 627 Pfam Glycosyl hydrolase family 3 N terminal domain 47 374 IPR001764 GO:0004553|GO:0005975
Vvi1g0067 627 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 411 620 IPR036881 GO:0004553|GO:0005975
Vvi1g0067 627 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 26 624 - -
Vvi1g0067 627 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 20 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0067 Vvi-Chr1 715659 718620 Dispersed/Transposed