Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0061 ATGACGTGGCACATAAAACCGTTATGCCACGTCATCAGTCCTCAGTCATCATCACTCCAAATCGTTGTTAGCTCCAGTTCTTCTCAACTGCTCTCGCTCGCTGCCCCTTCGCGGAAACTCCCACATTTTCCGGCCATGGCGATTCGCCGTCTCCTTAACCTCTCTGGCCGCCGATCTCACAGCGCTGCGGTCACTACTGCCACGTTATCACCACCACCCCCGCCTCCATCCTCCTCCTCCTCCTCCTCCTCGACTACCATGATATACGACCGCGCCGCGGATACTGTCAAGTCCAAGCTCAAACGTCTCGAGACGCCGGATTCACGCTTCCTCCGCTACACCTCCCCGCACCCTATCCTCGCCGACCACAGCGCCACCCTCTCCTCTCCTGAGACCCGAGTCACCACCCTCCCTAATGGCCTCCGAGTCGCCACAGAATCACGCCTCCCAGGCCGCGCCGCGGCTGTTGGTGTCTGGATCGACTCCGGGAGTCGCTTCGAGAGTGACGCCACCAACGGCGTGGCTCATTTTCTGGAACGCATGGTGTTCAAGGGCACGGAAAAGAGGCCGGCTAGGGTTTTGGTGGAGGAAATTGGGAGCATGGGCGGGCACTTGAGTGCCTGCACATCGAGGGAGCACACGGCATACTGCGCTGAGGTCATGGACGAAAATGTTCCCAAGGCGCTGGATCTTCTTTCCGATATGTTGCAGCATTCGTGTTTCCGTGAGGATCAGATGGAGCGCGAGCGCGATCTGATTCTTCAACAAATTAAAGAGGTACAGGGGCCCAGTAAGGATATTATCTTTGACCATTTGCATGCAACTGCATTCCAGTACACACCTTTGGGTAGAACTGTTCTGGGATCTGCGAAAAATATCAAGACTATCCACAAATCTCATATTAAAGACTATATTTCAGCTCACTGTGCTGCCCACAGAATGGTAATTTCTGCTGCTGGAGCTGTTAAGCATGAGGATATTGTTGAGCAAGTGAAGAAGACATTTACAAAGCTATCAGCTAATCCTTCCGTGACTAGTCAGTTGGTTGCAGAGAAGCCAGCTGTTTTCACTGGATCTGAGGTTCGGATAATTGACGATGATCTTCCTCTAGCACAATTTGCAGTTGCATTCAAAGGAGCTTCATGGACAGATCCAGATTCCATCGCTTTGATGGTCATCAAGTTGATGCTGGGCTCTTGGAACAAAAATGCAGGAGGGGGAAAGCACATGGGTTCACAGCTTGTACAGAGGGTTGCCATTAATGAAATAGCTGAATGCATGATGGCTTTTAACACTAACTATAAAGACACAGGCTTGTTTGGTGTTTATGCTGTAGCCAAGCCAGATTGCTTGGATGATTTAGCTTATGCAATAATGCTTGAGATAAGTAAGTTACCTTATCGAGTCTCAGAGGAGGATGTTATTCGTGCTCGTAATCAGCTGAAATCTTCTCTGCTTCTTCATATTAATGGACTCAGCCATGTTGTTGAAGACATTGGTCGTCAGCTACTTACTTATGGCCGAAGAATTCCATTGGCTGAATTATTTGCAAGGATTGACGCGGTGGATGCCAACACTGTCAAACGCATTGCAAACCGTTTTATATTTGATAGGGATATTGCAATTGCTGCCCTGGGACCCATCCAGGGTTTACCCGACTACAACTGGTTCAGGCGCAGGACCTACTTGCTGCGTTACTAA 1701 0.4997 MTWHIKPLCHVISPQSSSLQIVVSSSSSQLLSLAAPSRKLPHFPAMAIRRLLNLSGRRSHSAAVTTATLSPPPPPPSSSSSSSSTTMIYDRAADTVKSKLKRLETPDSRFLRYTSPHPILADHSATLSSPETRVTTLPNGLRVATESRLPGRAAAVGVWIDSGSRFESDATNGVAHFLERMVFKGTEKRPARVLVEEIGSMGGHLSACTSREHTAYCAEVMDENVPKALDLLSDMLQHSCFREDQMERERDLILQQIKEVQGPSKDIIFDHLHATAFQYTPLGRTVLGSAKNIKTIHKSHIKDYISAHCAAHRMVISAAGAVKHEDIVEQVKKTFTKLSANPSVTSQLVAEKPAVFTGSEVRIIDDDLPLAQFAVAFKGASWTDPDSIALMVIKLMLGSWNKNAGGGKHMGSQLVQRVAINEIAECMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMLEISKLPYRVSEEDVIRARNQLKSSLLLHINGLSHVVEDIGRQLLTYGRRIPLAELFARIDAVDANTVKRIANRFIFDRDIAIAALGPIQGLPDYNWFRRRTYLLRY* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0061 566 SUPERFAMILY LuxS/MPP-like metallohydrolase 129 335 IPR011249 GO:0046872
Vvi1g0061 566 MobiDBLite consensus disorder prediction 62 86 - -
Vvi1g0061 566 ProSitePatterns Insulinase family, zinc-binding region signature. 163 186 IPR001431 GO:0004222|GO:0006508
Vvi1g0061 566 FunFam Mitochondrial-processing peptidase subunit beta 122 340 - -
Vvi1g0061 566 SUPERFAMILY LuxS/MPP-like metallohydrolase 360 556 IPR011249 GO:0046872
Vvi1g0061 566 PANTHER METALLOPROTEASE 126 552 - -
Vvi1g0061 566 Pfam Peptidase M16 inactive domain 299 481 IPR007863 -
Vvi1g0061 566 Gene3D - 119 341 - -
Vvi1g0061 566 Gene3D - 348 566 - -
Vvi1g0061 566 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 352 566 - -
Vvi1g0061 566 Pfam Insulinase (Peptidase family M16) 142 288 IPR011765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0061 Vvi-Chr1 656141 666715 Dispersed