Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0055 ATGGAGACTGCGAAAGCCGCAAGAACTGTGAAAGACGTTTCTCCTCACGAGTTCGTCAAGGCCTATTCTTCTCACCTCAAGCGATCTGGGAAGATAGAGCTTCCTCACTGGACTGATATTGTGAAGACTGCTACGTTCAAGGAGCTTGCTCCATATGATCCTGATTGGTACTATGTAAGAGCTGCTTCAATGGCAAGGAAAATTTATTTGAGGCAGGGTCTAGGAGTTGGTGGCTTCCGAAGAATTTATGGTGGGAGCAAGAGGAATGGAAGTCGCCCACCCCACTTCTGTAAGAGCAGTGGTTCCATTGCTCGCCACATACTCCAACAGTTGGAGAAGATGAACATTATTGAAAATGACCCCAGGGGTGGAAGGAGAATCACATCCAGTGGCCAGCGGGATCTCGACCAAGTTGCTGGACGGATTGTAGTTGCCCTTTAA 441 0.483 METAKAARTVKDVSPHEFVKAYSSHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYVRAASMARKIYLRQGLGVGGFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLEKMNIIENDPRGGRRITSSGQRDLDQVAGRIVVAL* 147
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0055 146 Gene3D - 1 145 IPR036388 -
Vvi1g0055 146 ProSitePatterns Ribosomal protein S19e signature. 93 112 IPR018277 GO:0003735|GO:0005840|GO:0006412
Vvi1g0055 146 FunFam 40S ribosomal protein S19 5 146 - -
Vvi1g0055 146 SUPERFAMILY "Winged helix" DNA-binding domain 9 144 IPR036390 -
Vvi1g0055 146 Pfam Ribosomal protein S19e 9 143 IPR001266 GO:0003735|GO:0005840|GO:0006412
Vvi1g0055 146 PANTHER 40S RIBOSOMAL PROTEIN S19 9 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Vvi1g0055 146 SMART Ribosomal_S19e_2 9 145 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0055 Vvi-Chr1 599284 602644 Dispersed/Wgd