Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g0055 | ATGGAGACTGCGAAAGCCGCAAGAACTGTGAAAGACGTTTCTCCTCACGAGTTCGTCAAGGCCTATTCTTCTCACCTCAAGCGATCTGGGAAGATAGAGCTTCCTCACTGGACTGATATTGTGAAGACTGCTACGTTCAAGGAGCTTGCTCCATATGATCCTGATTGGTACTATGTAAGAGCTGCTTCAATGGCAAGGAAAATTTATTTGAGGCAGGGTCTAGGAGTTGGTGGCTTCCGAAGAATTTATGGTGGGAGCAAGAGGAATGGAAGTCGCCCACCCCACTTCTGTAAGAGCAGTGGTTCCATTGCTCGCCACATACTCCAACAGTTGGAGAAGATGAACATTATTGAAAATGACCCCAGGGGTGGAAGGAGAATCACATCCAGTGGCCAGCGGGATCTCGACCAAGTTGCTGGACGGATTGTAGTTGCCCTTTAA | 441 | 0.483 | METAKAARTVKDVSPHEFVKAYSSHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYVRAASMARKIYLRQGLGVGGFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLEKMNIIENDPRGGRRITSSGQRDLDQVAGRIVVAL* | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g0055 | 146 | Gene3D | - | 1 | 145 | IPR036388 | - | |
Vvi1g0055 | 146 | ProSitePatterns | Ribosomal protein S19e signature. | 93 | 112 | IPR018277 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0055 | 146 | FunFam | 40S ribosomal protein S19 | 5 | 146 | - | - | |
Vvi1g0055 | 146 | SUPERFAMILY | "Winged helix" DNA-binding domain | 9 | 144 | IPR036390 | - | |
Vvi1g0055 | 146 | Pfam | Ribosomal protein S19e | 9 | 143 | IPR001266 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0055 | 146 | PANTHER | 40S RIBOSOMAL PROTEIN S19 | 9 | 142 | IPR001266 | GO:0003735|GO:0005840|GO:0006412 | |
Vvi1g0055 | 146 | SMART | Ribosomal_S19e_2 | 9 | 145 | IPR001266 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi1g0055 | Vvi-Chr1 | 599284 | 602644 | Dispersed/Wgd |