Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0052 ATGTTTCCAATTTTATCTTTCTGCCTCTTCTTCGTCCTCGCTCCTCCTCTCCTCGCATCTTCTTCTCCAGTCTCCATAACCCTAACCGCCAAAATCTTAGCCAAATCGGGCGACCCGATCCGAATCAAATGGTCGGGGATCGACTCCCCGTCCGACCTCGACTGGCTCGGCATCTACTCGCCGCCGTCCTCCGCCCACGACAACTTCATTGGCTATGTTTTTCTGTCGTCATGTCCCACATGGGAATCTGGATCGGGTTCGATCAGCTTACCCCTGGTTAATCTCCGTGCTAACTACTCTTTTCGGATATTCCGGTGGTCCCGGTCCGAGGTCGACCCGACCCGGATGGACCACGACCACAATCCCTTGCCGGGGACAACGCATCTGGTGGCGGAGTCCGGGGAGGTGGGGTTCGGGGGCGGCGGGGGGCCGGAGCAGATCCATTTGGCGTACACGGATAGGGAGGATGAGATGCGGGTGATGTTCGTGACGGGGGACGCGGGCGTGAGGACTGTGAGGTATGGCTTGAGCAGGGACGCGATGCACAGGGTGGTGACGGCGGCGGTGGGGAGATATGAGAGGGAGGACATGTGTGACTCGCCAGCGAATGAGAGTGTTGGGTGGAGAGATCCGGGTTTTATTCAAGATGCGGTGATGAGGAATTTGAAGAAAGGGAAGAGATATTATTATAAGGTTGGAAGTGATTCAGGAGGTTGGAGCGCAATTCACAACTTTATGTCACGGGATATGGACTCTGAAAAAACAATAGCTTTTCTATTTGGTGACATGGGGACAGCAACACCATACTCAACCTTTCTTCGTACACAAGAGGAAAGCAAGTCAACCGTTAAATGGATCCTCCGTGACATTGAGGCTCTTGATGACAACCCTGCCTTCATCTCGCATATTGGAGATATTAGCTATGCTAGAGGTTATTCATGGTTGTGGGACAATTTTTTCACTCAGGTTGAACCTATCGCCTCCAGACTCCCATACCATGTGTGTATTGGTAATCATGAATATGATTGGCCATTGCAGCCTTGGAAACCTGATTGGTCCTCCACAGTTTATGGAACAGATGGTGGCGGTGAATGTGGAGTGCCCTACAGCCTTAAGTTCAAAATGCCTGGAAACTCTTCAGAACTAACTGGAACCCGTGCCCCAGCCACTCGAAACCTCTTCTACTCATTTGATACGAAGGCAGTGCATTTTGTGTACATATCAACTGAGACCAATTTCCTTCCAGGGAGCAGCCAATATGACTTTATAAAGCAGGATTTGGAGTCAGTTGATCGGAAAAAAACCCCTTTTGTGGTTGTCCAAGGGCACAGACCAATGTACACAACAAGCAATGAACTTAGAGATGCCCCAGTGAGGGAGAGGATGCTCAAGTATTTGGAACCTCTTTTTGTGAAGAACAATGTGACCCTTGCACTCTGGGGTCATGTCCACAGATATGAGAGGTTTTGCCCAATAAATAACTTCACTTGTGGAAACATGGGATTGAATGGGGAATACCTGGGGGGATTGCCTGTTCATATCGTGATTGGGATGGCAGGGCAAGACTGGCAGCCCACATGGGAACCAAGACCAGACCACCCGAAGGACCCTGTCTACCCACAACCTAAATGGTCATTGTACCGTGGGGGTGAGTTTGGGTACACTAGGTTGGTTGCCACCAAAGAGAAGCTTACTCTTTCTTATGTAGGAAACCATGATGGTGAGGTGCATGATACTGTTGAGATTCTGGCATCTGGACAAGTTCTCAGTGGTGTTGGAGAGGATGATGCTCAACCCAGAGTTGAGGTGGCAGAGTACACATTTTCATGGTATGTTAAGGGGGCAAGTATCTTGGTGCTGGGGGCTTTTATGGGCTATGTTATTGGGTTCGTATCACATGCCAGGAGAGAAGCTGCCTTGAGAAAGAACTGGACTCCAGTGAAGATCGAAGATAGCTGA 1959 0.4997 MFPILSFCLFFVLAPPLLASSSPVSITLTAKILAKSGDPIRIKWSGIDSPSDLDWLGIYSPPSSAHDNFIGYVFLSSCPTWESGSGSISLPLVNLRANYSFRIFRWSRSEVDPTRMDHDHNPLPGTTHLVAESGEVGFGGGGGPEQIHLAYTDREDEMRVMFVTGDAGVRTVRYGLSRDAMHRVVTAAVGRYEREDMCDSPANESVGWRDPGFIQDAVMRNLKKGKRYYYKVGSDSGGWSAIHNFMSRDMDSEKTIAFLFGDMGTATPYSTFLRTQEESKSTVKWILRDIEALDDNPAFISHIGDISYARGYSWLWDNFFTQVEPIASRLPYHVCIGNHEYDWPLQPWKPDWSSTVYGTDGGGECGVPYSLKFKMPGNSSELTGTRAPATRNLFYSFDTKAVHFVYISTETNFLPGSSQYDFIKQDLESVDRKKTPFVVVQGHRPMYTTSNELRDAPVRERMLKYLEPLFVKNNVTLALWGHVHRYERFCPINNFTCGNMGLNGEYLGGLPVHIVIGMAGQDWQPTWEPRPDHPKDPVYPQPKWSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDTVEILASGQVLSGVGEDDAQPRVEVAEYTFSWYVKGASILVLGAFMGYVIGFVSHARREAALRKNWTPVKIEDS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0052 652 Gene3D - 253 592 IPR029052 -
Vvi1g0052 652 CDD MPP_PAPs 251 582 IPR041792 -
Vvi1g0052 652 Gene3D - 143 249 - -
Vvi1g0052 652 Pfam Calcineurin-like phosphoesterase 260 486 IPR004843 GO:0016787
Vvi1g0052 652 Pfam Iron/zinc purple acid phosphatase-like protein C 511 578 IPR025733 -
Vvi1g0052 652 SUPERFAMILY Purple acid phosphatase, N-terminal domain 137 247 IPR008963 GO:0003993|GO:0046872
Vvi1g0052 652 SUPERFAMILY Metallo-dependent phosphatases 259 580 IPR029052 -
Vvi1g0052 652 Pfam Purple acid Phosphatase, N-terminal domain 144 245 IPR015914 GO:0003993|GO:0046872
Vvi1g0052 652 PANTHER PURPLE ACID PHOSPHATASE-RELATED 26 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0052 Vvi-Chr1 586502 589715 Dispersed