Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0049 ATGTCGACCGAGAAGGAAAGAGAGACTCAGGTTTACATGGCCAAGCTCGCCGAACAGGCTGAGCGCTATGAAGAAATGGTGGAGTGTATGAAAACAGTGGCAAAACTCGACCTTGAGCTAACTGTGGAGGAGAGGAACCTCCTCTCTGTGGGGTACAAAAATGTTATAGGCGCTCGACGTGCTTCTTGGCGCATTATGTCTTCGATTGAGCAGAAAGAAGAGTCAAAGGGAAACGAGCAGAATGTTAAACTGATTAAGGGTTACCGCCAGAAGGTTGAGGAGGAGCTCTCCAAGATTTGTGGTGACATTCTGACAATCATAGACAAACACCTGATCCCCTCTTCTGGCTCGGGGGAAGCCACTGTGTTCTATTACAAGATGAAAGGTGACTACTACCGGTATCTGGCTGAGTTCAAGACTGACCAGGAAAGGAAAGAGGCCTCTGAGCAGTCACTGAAGGGCTACGAGGCTGCCTCCAGCACTGCTAACACTGACCTCCCTTCAACCCACCCAATCCGTCTTGGCCTTGCTCTCAACTTCTCTGTCTTCTACTATGAGATAATGAATTCTCCTGAAAGGGCCTGCCATTTGGCTAAGCAAGCTTTTGATGAGGCAATTGCAGAATTGGACACCTTGAGCGAGGAGTCATACAAGGACAGCACTCTGATTATGCAGCTGTTGAGAGACAACCTCACTCTCTGGACCTCTGATTTGCCTGAAGATGGAGGTGAAGACAACTTCAAAGGTGAAGAACCCAAGGCTGCTGAACCTACTGAGCATTGA 783 0.4866 MSTEKERETQVYMAKLAEQAERYEEMVECMKTVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEQNVKLIKGYRQKVEEELSKICGDILTIIDKHLIPSSGSGEATVFYYKMKGDYYRYLAEFKTDQERKEASEQSLKGYEAASSTANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNFKGEEPKAAEPTEH* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0049 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Vvi1g0049 260 Pfam 14-3-3 protein 13 235 IPR023410 -
Vvi1g0049 260 Coils Coil 13 33 - -
Vvi1g0049 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Vvi1g0049 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Vvi1g0049 260 MobiDBLite consensus disorder prediction 238 260 - -
Vvi1g0049 260 Coils Coil 195 215 - -
Vvi1g0049 260 MobiDBLite consensus disorder prediction 241 260 - -
Vvi1g0049 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Vvi1g0049 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Vvi1g0049 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Vvi1g0049 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Vvi1g0049 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Vvi1g0049 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Vvi1g0049 260 SMART 1433_4 7 248 IPR023410 -
Vvi1g0049 260 PIRSF 14-3-3 1 247 IPR000308 -
Vvi1g0049 260 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Vvi1g0049 260 Gene3D - 1 247 IPR036815 -
Vvi1g0049 260 FunFam 14-3-3 protein epsilon 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0049 Vvi-Chr1 563636 566636 Dispersed/Transposed