Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0047 ATGGCTTCGCTGGCGGCTTCGGTTCGTTGCTCTCAGTTTTCTTCTCTGGGCTTGAATGCGAAGAGAATTTCGCGTAATTATGGACTGCCCAGGACTCCATCACTTGTTTCTGCGAGTCCCTTCTCGGCGCTGCCGGAGATTCGAGTGTCTGCGGCTCCGGTTCAATTCTCCGGCAATGCTTTGAAATTTGCTGGTTGGGATCCTCTGCTGAGGCGGCAAGGTGGCGCCGGAGTAAAACTTCCTGTTCCGGCGGCTGCAGCTGCGGATGCCGATGGTGTTACAAAGCCTTCAAAGAGCTTTGCAGAGAAATTCCCCGTCCTGGTCACCGGATTCTTTTTCTTTATGTGGTACTTCTTGAATGTAATTTTCAACATACTTAACAAGAAGGTTTATAATTATTTCCCATACCCATACTTTGTTTCTCTTATACATCTCCTTGTGGGCGTGGCCTACTGTCTTGTCAGTTGGGCTGTTGGTTTACCAAAACGAGCTCCGATGGATAAGGAGCTCCTGCTGCTCCTCACTCCTGTTGCACTCTGCCATGCCCTTGGACATGTTATGTCTAATGTGTCATTTGCAGCGGTGGCTGTGTCATTTACCCACACTATCAAAGCCCTGGAGCCATTTTTCAATGCTGCTGCTTCTCAGTTTGTTTTAGGCCATCAAATTCCCTTTTCCCTCTGGCTGTCATTGGCCCCTGTTGTTATTGGCGTATCAATGGCATCTCTGACTGAACTTTCTTTTAACTGGACTGGCTTCATTAGTGCAATGATTTCAAATATTGCATTTACCTACAGAAGTATATATTCAAAGAAAGCAATGACGGGAATGGACAGCACAAATGTATATGCATACACTTCAATAATCGCCCTCCTGTTTTGCATCCCACCGGCAGTACTGATTGAGGGGCCTCAGCTGATGCAGTATGGTTTCAGGGATGCAATTGCTAAAGTCGGTCTAACCAAATTTTTGTCTGATCTATTTTGGATTGGAATGTTTTACCATCTGTACAATCAGCTTGCTACCAACACCTTGGAACGGGTTGCGCCGCTTACACATGCAGTTGGAAATGTGTTGAAGCGAGTTTTTGTCATTGGATTCTCCATTGTTATATTCGGGAACAAAATCTCTAGGCAGACTGGGATTGGAACTGCAATAGCCATTGCTGGTGTTGCCATTTACTCCCTCATAAAGGCAAACATTGAAGAGCAAAAACGGAAAGCTGCTGTAACTCCAGCATCATAG 1245 0.4594 MASLAASVRCSQFSSLGLNAKRISRNYGLPRTPSLVSASPFSALPEIRVSAAPVQFSGNALKFAGWDPLLRRQGGAGVKLPVPAAAAADADGVTKPSKSFAEKFPVLVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSLIHLLVGVAYCLVSWAVGLPKRAPMDKELLLLLTPVALCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFRDAIAKVGLTKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISRQTGIGTAIAIAGVAIYSLIKANIEEQKRKAAVTPAS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0047 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 244 - -
Vvi1g0047 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 324 396 - -
Vvi1g0047 414 PANTHER SOLUTE CARRIER FAMILY 35 110 402 - -
Vvi1g0047 414 Pfam Triose-phosphate Transporter family 108 395 IPR004853 -
Vvi1g0047 414 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 405 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0047 Vvi-Chr1 550648 555817 Dispersed/Tandem