Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0043 ATGTTCACCCTCGTCGCCGGTTCTGTACCGGCGGGTTTGGGAGCAACGGCGAAATGCGGAAGCCTCTGGCAATTCAGAGCAACTGCCGATGTGTTCCCTTCATTCATTCCGAAAGAAGTCGAGAGAATCAAAGACCCATTTGCTCGAAAGCTAGCGACAAGGATCGAGAGACTACCTGTGCAGCTTAGCTCCTCTAACAGTTGTATCATGAGCAGTTGCGTGAAGCCATTATCACCAAGCAAGACAAGTCCAGTGGTTCTCCTCCATGGTTTTGACAGCTCCTGTTTAGAATGGAGATACACATATCCGCTGCTCGAGGAGGCTGGTTTAGAGACATGGGCTGTTGACATTCTTGGTTGGGGCTTCTCTGATTTAGAAAGGCTTCCATCTTGTGACGTGGCAACTAAGCGTGATCACTTTTATCAGCTTTGGAAGTCCCACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGTGCTGCAGTTGCAATTGACTTTACAGCTAACCATCCAGAAGCTGTTGATAAGCTGGTCTTAATTGATGCAAGTGTATATACAGAAGGCACGGGAAACCTAATGAAGTTACCCAGGGCGGTTGCCTATGCTGGGGTCTATATATTGAAGAGCATTCCTCTGCGCTTTTATGCAAATGTTTTGGCTTTCAAGAGTATATCATTCACTAGAAGCTCAGACTGGACAAAAGTGGGCCGCCTACATTGTCTATATCCCTGGTGGGAGGATGCAACTGTGAATTTTATGATTAGTGGGGGTTATAATGTTAGTTCTCAGATACAACAGGTAAAGAAGAAGACACTTATCATATGGGGTGAGGATGACCAGATAATCAGCAACAAGCTTGCTGTGAGGTTACATTGTGAATTGCCGAATGCAATTATAAGCCAAATACCAGATTGTGGGCACCTCCCTCATGTGGAAAAGCCTCACTCTGTTTCCAAGTTGATTATGGAATTTGTTCAAGAGGATAGCTATAAAGAGGCCCAATGCATTTCCCAGTATTGA 1023 0.4536 MFTLVAGSVPAGLGATAKCGSLWQFRATADVFPSFIPKEVERIKDPFARKLATRIERLPVQLSSSNSCIMSSCVKPLSPSKTSPVVLLHGFDSSCLEWRYTYPLLEEAGLETWAVDILGWGFSDLERLPSCDVATKRDHFYQLWKSHIKRPMILVGPSLGAAVAIDFTANHPEAVDKLVLIDASVYTEGTGNLMKLPRAVAYAGVYILKSIPLRFYANVLAFKSISFTRSSDWTKVGRLHCLYPWWEDATVNFMISGGYNVSSQIQQVKKKTLIIWGEDDQIISNKLAVRLHCELPNAIISQIPDCGHLPHVEKPHSVSKLIMEFVQEDSYKEAQCISQY* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0043 340 SUPERFAMILY alpha/beta-Hydrolases 83 327 IPR029058 -
Vvi1g0043 340 Pfam Alpha/beta hydrolase family 85 318 IPR000073 -
Vvi1g0043 340 PRINTS Alpha/beta hydrolase fold signature 154 167 IPR000073 -
Vvi1g0043 340 PRINTS Alpha/beta hydrolase fold signature 272 286 IPR000073 -
Vvi1g0043 340 PRINTS Alpha/beta hydrolase fold signature 109 124 IPR000073 -
Vvi1g0043 340 PRINTS Alpha/beta hydrolase fold signature 168 181 IPR000073 -
Vvi1g0043 340 PANTHER HYDROLASE 27 331 - -
Vvi1g0043 340 PRINTS Epoxide hydrolase signature 89 107 IPR000639 GO:0003824
Vvi1g0043 340 PRINTS Epoxide hydrolase signature 109 124 IPR000639 GO:0003824
Vvi1g0043 340 PRINTS Epoxide hydrolase signature 303 325 IPR000639 GO:0003824
Vvi1g0043 340 Gene3D alpha/beta hydrolase 75 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0043 Vvi-Chr1 515760 520675 Dispersed