Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0021 ATGGCTCATTCCTGTGTTCACAAAGATAGAGGGGAGTTGAGGATTTATGAAAATTTGAATGAGCTCAGCACCGATTTAGCCGACTATATCGCTGAATTATCAGAGGTCTCGGTGAAAGAGCGAGGTGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGACTTGATGGGAAAACTGTATGAAGCTCCTTACAACAAGACTGTTGACTGGGCTAAATGGTATATATTTTGGGCGGATGAGCGTGTGGTGGCAAAGAACCATTCTGATAGCAATTATAAGTTAGCAAAAGATGGCCTATTGTCCAAGGTGCCTGTTGTTCCCAGCCATGTACATTCTATCAATGATACGGTGACAGCAGAGGAAGCTGCTGATGAGTATGGGTTTGCCATACGACAGCTAGTGAAGACCCGCGTCATCAGCGTATCTGATACCAGTGATTGCCCCAAGTTTGATCTCATCCTTCTTGGAATGGGCTCTGATGGACATGTTGCCTCGCTGTTCCCTAATCATTCTGTGCTCGAGGAGAAGGATGAATGGGTAACTTTTATAACTGATTCTCCCAAGCCTCCACCGGAGAGGATTACTTTCACACTGCCCGTCATCAACTCAGCGTCCAATGTGGCTGTGGTCATCACAGGTGGCAACAAAGCAGAGGCCGTACACTTGGCAATTGATGATGTGGGACCTGACTGCCCATCACTGCCTGCGCGGATGGTCCAGCCAACTAAGGGGAAGTTGGTGTGGTTTATTGACAAGCCGGCTGCCCTGAAACTTGATTGCTGTCAATTCTCTGAATAG 801 0.4719 MAHSCVHKDRGELRIYENLNELSTDLADYIAELSEVSVKERGVFAIALSGGSLIDLMGKLYEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKDGLLSKVPVVPSHVHSINDTVTAEEAADEYGFAIRQLVKTRVISVSDTSDCPKFDLILLGMGSDGHVASLFPNHSVLEEKDEWVTFITDSPKPPPERITFTLPVINSASNVAVVITGGNKAEAVHLAIDDVGPDCPSLPARMVQPTKGKLVWFIDKPAALKLDCCQFSE* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0021 266 PANTHER 6-PHOSPHOGLUCONOLACTONASE 7 259 IPR039104 -
Vvi1g0021 266 FunFam Probable 6-phosphogluconolactonase 8 260 - -
Vvi1g0021 266 CDD 6PGL 21 251 IPR005900 GO:0005975|GO:0006098|GO:0017057
Vvi1g0021 266 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 20 249 IPR006148 GO:0005975
Vvi1g0021 266 Gene3D - 9 261 - -
Vvi1g0021 266 NCBIfam 6-phosphogluconolactonase 15 258 IPR005900 GO:0005975|GO:0006098|GO:0017057
Vvi1g0021 266 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 261 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0021 Vvi-Chr1 312775 316365 Dispersed