Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0018 ATGCCCACTCTCACAAAGCTCTTCTCCATGCAAGAGGCCTCTCTCCACAACTCCAAGGACGACTGTTGGGTCGTCATCGATGGCAAGGTATATGATGTGACAACTTATTTGGATGAACACCCTGGTGGAGATGATGTGATCCTTGCTACAACTGGGAAAGATGCCACCGATGATTTTGAGGATGCTGGGCATAGCAATGATGCAAGGGAGCTTATGAAGAGCTTTTGTGTTGGGGAGCTTGATATGTCTTCCCCAGCTATTCCAGAACTTAAAATCTCTGACAAGAAACAACAAACAGATGTTGCTCAGAAGCTCTTGAACTTGACAAAACAATACTGGGCTGTTTCTGTAGCCATAGTTGGCATCTCTGTGGTGGCTGGCTTCTTGTTTATGCGGAAGAAGTAA 405 0.4568 MPTLTKLFSMQEASLHNSKDDCWVVIDGKVYDVTTYLDEHPGGDDVILATTGKDATDDFEDAGHSNDARELMKSFCVGELDMSSPAIPELKISDKKQQTDVAQKLLNLTKQYWAVSVAIVGISVVAGFLFMRKK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0018 134 PANTHER CYTOCHROME B5 4 126 - -
Vvi1g0018 134 FunFam Cytochrome b5 type B 3 85 - -
Vvi1g0018 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
Vvi1g0018 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vvi1g0018 134 SMART Cyt_b5_2 8 81 IPR001199 -
Vvi1g0018 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Vvi1g0018 134 Gene3D - 3 85 IPR036400 -
Vvi1g0018 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vvi1g0018 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vvi1g0018 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vvi1g0018 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vvi1g0018 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0018 Vvi-Chr1 297239 301772 Dispersed