Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1425 ATGAGGTGGTGTTTTTCCTTTGTCTTTGTCCTTGTCCTTGTTGTTCTTCACTTGGATGGGTTAGCCAAGAGCGGAGCACTTGCGACCCCAAAGACAGCATCGCCAAAGGTGTCGTCTCCTCAAGATTTACTCTCTTTCACTCACTATCTCAACACATGCCCCGATGTTGAAGGCATCATCCAAAACAAGGTTAGGGCTTGGGTTAAGAAGGATTACACCTTGGCTGCTAGCATTATCCGCTTGCACTTCCATGATTGTGCCGTTAGGGGATGCGATGCATCGATTTTGCTAAATCATGCAGGGAGTGAGAGGAGGGCTGAGGCCAGCAAGACACTGAGGGGATTCCAGGTGATAGAGGAGATCAAAGCAGAGGTTGAGAAGAGGTGTCCCGGAAGAGTCTCATGTGCGGACATTCTCACAGCTGCTGCAAGAGATGCCACCGTCCTCATTGGAGGTCCGTTCTGGGAAGTCCCTTTCGGGAGGAAAGATGGGAAGGTCTCCATTGCCAGAGAAGCCAACAGGGTTCCTCAGGGCCACGAAAACGTCACTGACTTGATCCAATTCTTCCAAGCTCGAGGCTTGAACATACTGGATCTGGTCATCCTCTCAGGCTCACACACCATCGGCAGGAGCACCTGCCATTCCATTCAACACAGGCTCTCCAACTTTAATGGGACATACAAGCCCAATCCCTCACTCAATGCCACATACCTGAGGGTGCTGAAGGGGAAATGTGGGAGGAGGTACAACTACGTGGATCTAGATGGTACAACTCCGAGGAAATTTGATACAGAATACTACAAGAATCTAGGGAAGAAGATGGGGTTGCTGTCGACGGATCAAGGACTGTATAGGGATTCAAGAACTTCACCGATTGTTGAGGCATTGGCAACTCAGCCGGAGCTTTTCACGAACCAGTTTGCAGTGTCGATGGTGAAGCTGGGCAATGTCCAAGTTCTTACCGGGAAGAAAGATGGAGAAATAAGAGGGAACTGCAATTTGGTTAATCCTTACTGA 1017 0.4946 MRWCFSFVFVLVLVVLHLDGLAKSGALATPKTASPKVSSPQDLLSFTHYLNTCPDVEGIIQNKVRAWVKKDYTLAASIIRLHFHDCAVRGCDASILLNHAGSERRAEASKTLRGFQVIEEIKAEVEKRCPGRVSCADILTAAARDATVLIGGPFWEVPFGRKDGKVSIAREANRVPQGHENVTDLIQFFQARGLNILDLVILSGSHTIGRSTCHSIQHRLSNFNGTYKPNPSLNATYLRVLKGKCGRRYNYVDLDGTTPRKFDTEYYKNLGKKMGLLSTDQGLYRDSRTSPIVEALATQPELFTNQFAVSMVKLGNVQVLTGKKDGEIRGNCNLVNPY* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1425 338 CDD secretory_peroxidase 44 335 IPR033905 GO:0004601|GO:0042744
Vvi19g1425 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Vvi19g1425 338 Gene3D Peroxidase, domain 2 176 314 - -
Vvi19g1425 338 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Vvi19g1425 338 ProSiteProfiles Plant heme peroxidase family profile. 43 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 FunFam Peroxidase 47 187 - -
Vvi19g1425 338 Pfam Peroxidase 61 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PANTHER PEROXIDASE 25-RELATED 14 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 SUPERFAMILY Heme-dependent peroxidases 44 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g1425 338 FunFam Peroxidase 176 314 - -
Vvi19g1425 338 Gene3D - 48 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1425 Vvi-Chr19 23628375 23629597 Transposed