Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1409 ATGACTTACGGGTCTCAACTATTGTTTATTGTTTCTGAAGGTTTTTCTCGATTTGGGTTTCATAATTTGCTGCTCATCTGCCATTTTTATAGGCAGAATTTCTTGATTCAGATAAGCATGGATCCACAAAGTGCTATAGCTCAAGTTAAGAGGGCTGGTCTTTTTCGGACCCAGGGCCTTATTGGAGGAAAATGGATGGATGCTTATGATGGGAAGACTTTTGAGGTCTACAATCCCGCAACCGGTGAAGTTCTAGCTAATGTCGCGTGCATGGGTAAGAAGGAGGCCAATGATGCGATAGCTTCAGCTCATGCTGCATTCACTTCTTGGAGCAAACTTACTACTGCTGAAAGGAGTAAACTTATGAGGAAATGGTACGATTTACTAATTGCCCATCAAACCGAGCTTGGTCAACTTATAACACTGGAGCAAGGAAAACCTGTAGCGGAAGGCTATAATGAGGTCTTGATTGGGGCTAGTTGTTTGGAGTTCTTTCTTGAGGAAGTGAAGCATTGTTATGGTGATATAATTCCACAAACACAAGCAGATCGCCGAATGTTTGTTTTAAAGCAGCCTGTAGGTGTTGTTGGTGCAATTACTCCCTGGAACCTTCCATTGGCTATGGCTCTTCGGAAGGTTAGTCCTGCCATGGCTTGTGGCTGCACAGTGGTTATAAAGCCCTCTGAATTAACTCCATTGTCAGCCTTAGCAGTAGCTGAACTTGCTCTTCAAGCTGGAATTCCACCGGGTGTTTTCAACATGGTCATGGGATTTGCCCCTGAGATTGGGGATGCCTTCCTTGCAAGTCCAAAGGTTAGGGCGATCACTTTTACGGGCTCAACAGCTGTTGGGAAGATGTTGCTGGCTGGTGCTGCTCAGACTGTTAAAAAGACATCTATGGAACTTGGCGGTAATGCACCTAGCATGATATTTGATGATGCAGACTTGGAGGTGACCGTGAAAGGACTTATGATTGTGAAATTCTTTAATTGTGGACAAACATGTATTTCTCCGAATAGAATATTGGTACAAGAAGGTATTCACGATAAATTTGCAGCTGCCCTTACAAAAGCTGTCCAGACTCTGCGAGTTGGGCATGGCTTTGATGAAGGTGTGACCCAGGGCCCACTGATTAATCAAGCTGCATTGCACAAGATTGAGGCATTGGTTGAAGATGCTGTCTCACAGGGGGCAAAAGTCCTCGTTGGGGGTAAAAGACACAGTTTGGGATTGACTTTTTATGAGCCCACAGTACTTGTCGATGTCACTAGTGATATGCTTATATCAAGTACCGAAATATTTGGACCTGTTCTAGCCCTGCAGCGATTTAAGACTGAGGAGGAAGCTATCCACCTTGCAAATGACAGTAATGCAGGTTTAGCAGGCTACATTTACACAGAGAACTTGCGTCGCTGTTGGCGTGTCGCTGAAGCTATCGAATTTGGAATTGTTGGTGTCAATGATGGATTAATTCCAGCAGCGAGTGCTCCATTTGGTGGGTTTAAGCAGTCTGGTCTTGGACGTGAAGGATCCAAGTATGGGTTGGATGATTTTCTAGAAATCAAATATCTGTGCTTGGGAAATATGGTGTAA 1593 0.4426 MTYGSQLLFIVSEGFSRFGFHNLLLICHFYRQNFLIQISMDPQSAIAQVKRAGLFRTQGLIGGKWMDAYDGKTFEVYNPATGEVLANVACMGKKEANDAIASAHAAFTSWSKLTTAERSKLMRKWYDLLIAHQTELGQLITLEQGKPVAEGYNEVLIGASCLEFFLEEVKHCYGDIIPQTQADRRMFVLKQPVGVVGAITPWNLPLAMALRKVSPAMACGCTVVIKPSELTPLSALAVAELALQAGIPPGVFNMVMGFAPEIGDAFLASPKVRAITFTGSTAVGKMLLAGAAQTVKKTSMELGGNAPSMIFDDADLEVTVKGLMIVKFFNCGQTCISPNRILVQEGIHDKFAAALTKAVQTLRVGHGFDEGVTQGPLINQAALHKIEALVEDAVSQGAKVLVGGKRHSLGLTFYEPTVLVDVTSDMLISSTEIFGPVLALQRFKTEEEAIHLANDSNAGLAGYIYTENLRRCWRVAEAIEFGIVGVNDGLIPAASAPFGGFKQSGLGREGSKYGLDDFLEIKYLCLGNMV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1409 530 Pfam Aldehyde dehydrogenase family 65 523 IPR015590 GO:0016491
Vvi19g1409 530 FunFam Succinate-semialdehyde dehydrogenase I 71 314 - -
Vvi19g1409 530 SUPERFAMILY ALDH-like 54 527 IPR016161 GO:0016491
Vvi19g1409 530 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 300 307 IPR029510 GO:0016491
Vvi19g1409 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Vvi19g1409 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 71 518 IPR016162 GO:0016491
Vvi19g1409 530 FunFam Aldehyde dehydrogenase, putative 496 522 - -
Vvi19g1409 530 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 51 529 - -
Vvi19g1409 530 CDD ALDH_F5_SSADH_GabD 76 526 - -
Vvi19g1409 530 FunFam Succinate-semialdehyde dehydrogenase I 304 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1409 Vvi-Chr19 23325948 23339305 Tandem