Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1400 ATGGAGATGAAAGCAGAGCTGGTCTTCATCCCCATCCCTGAGATTGGCCACTTCCAATCCATGCTTCAGCTCGCCAACCATCTAGTCAGCCGCCACCACGCCCTCTCCGTCACCTTCCTTACCTTCAACGCCTTTTTTGCCTCAGCCCCACCACCACCACCCGCCGCCCCCTCCTTCCCCGGAATCCGCTTCATCACCCTCCCTCAAGTTGACCTTCCTCAACTCGACGACATCTCCGGTGTGGACTGCTATCTTCTCTCTCTCCAGCTCCTGAAACCCCACGTTAAGCACGCGATACAGACCCATGTGCTCGCCTCTGACTCCCCCCAGCTCGCCGGGTTGGTACTGGACCCGTTAGCCTCCGCCATGATCGACCTAGCCGCGGAGCTCGGCGTCGCTTCTTATATCTATTTCCCCAGCGGAGCAGCAATGTTGGAACAAGTGCTTCGTTTCCCAGATCTCGATTCTCAAGTCAGTGAACTCCCTGCCACCAAGTTAACCCTCCCGATTTCAGTCAACTCAGTTCCCCGGCGGGTTCTGCAGACGGCCATGCTGGAAAAAGACGAAGATGGGTACGATCCGATGCTCTACCTAGGACGGAGGTTTCGAGAAGCTAAGGGTATTATCGTAAATACACTCATAGAGTTAGAGCCCGATGTGGCGGAGCTGGTTTCGAATAGGCAGTATCCGCCGGTTTATCCACTTGGACCGTTGATAGACCGGTCTGACTGGACTGATGATCGTATCATCACGTGGCTCGATGGTAAGCTGGCCGGTTCGGTGGTGTTCCTCTGCTTCGGTAGCAGAGGGGCATTGGGTGCGGCTCAGGTGCAAGAGGTAGCGCATGGACTCGAGCGCAGTGGATACAGCTTCCTCTGGTCATTACGCCAGCCGCCGCGGGTGAAACACGCTCTACCCTCAGATTATACGAATCCGGCCGAAGTCTTGCCAGATGGCTTCCTAGATCGCACGGCGGAGAAGGGCTTAGTTTGTGGATGGACCCCACAGTTGAAGATCCTGAGCCATCCATCAATAGGGGGGTTCATTTCCCACGGTGGGTGGAACTCCATCCTGGAGAGTTTGTGGTGTGGTGTACCGATTATGGTGTGGCCTATGTACGCAGAGCAAAAACTCAATGCGTGTAAAATAGTGAGAGAATTGGGATTGGGTGTGGGAGTCACAGAGAATGAGGACTTCATTGACGGTCGAGATTTGTTAATGATTTACACGGACGGTGGAGAGCTAGTAAAGTGCGAAAAGCTGGAGATAGGAGTGAAGAGGTTGATGGACGGTGATAACGAGGTGAGGAGGAAGGTGAAGCAGATGAGTGACACGTTTCGAGAGGCTGTGATGGACGGTGGATCTTCGTTTGTCGTACTGCAACAATTTATTGATGATGTTTTCACCGAAATAAAATAA 1419 0.5342 MEMKAELVFIPIPEIGHFQSMLQLANHLVSRHHALSVTFLTFNAFFASAPPPPPAAPSFPGIRFITLPQVDLPQLDDISGVDCYLLSLQLLKPHVKHAIQTHVLASDSPQLAGLVLDPLASAMIDLAAELGVASYIYFPSGAAMLEQVLRFPDLDSQVSELPATKLTLPISVNSVPRRVLQTAMLEKDEDGYDPMLYLGRRFREAKGIIVNTLIELEPDVAELVSNRQYPPVYPLGPLIDRSDWTDDRIITWLDGKLAGSVVFLCFGSRGALGAAQVQEVAHGLERSGYSFLWSLRQPPRVKHALPSDYTNPAEVLPDGFLDRTAEKGLVCGWTPQLKILSHPSIGGFISHGGWNSILESLWCGVPIMVWPMYAEQKLNACKIVRELGLGVGVTENEDFIDGRDLLMIYTDGGELVKCEKLEIGVKRLMDGDNEVRRKVKQMSDTFREAVMDGGSSFVVLQQFIDDVFTEIK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1400 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 467 - -
Vvi19g1400 472 Gene3D Glycogen Phosphorylase B; 247 451 - -
Vvi19g1400 472 PANTHER GLYCOSYLTRANSFERASE 6 466 - -
Vvi19g1400 472 CDD GT1_Gtf-like 8 460 IPR002213 GO:0008194
Vvi19g1400 472 ProSitePatterns UDP-glycosyltransferases signature. 333 376 IPR035595 -
Vvi19g1400 472 Gene3D Glycogen Phosphorylase B; 7 456 - -
Vvi19g1400 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 386 IPR002213 GO:0008194
Vvi19g1400 472 FunFam Glycosyltransferase 240 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1400 Vvi-Chr19 23206320 23207738 Tandem