Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1396 ATGGATTCTTCAACAATGCTGTACAACCAGCTCAAGTCATCAGAACCCTTTTTCTTGTTGGCTGGTCCCAATGTGATTGAATCTGAGGAGCACATTATGTATATGGCCAAAGCCATCAAGAGTCTCACATCAAAATTTGGGTTGAAGCTGGTTTTCAAGTCGAGCTTTGATAAAGCCAATCGAACCTCCTCAAAATCATTTCGGGGTCCTGGCATGATTGAAGGCCTGAAGATCCTTGAGAAGGTCAAAGTAGCATATGACATCCCCATAGTGACTGATGTACATGAAATTGAACAGTGTGAACCAGTTGGCAGAGTTGCAGACATCATTCAGATTCCAGCTTTCCTCTGTCGTCAGACAGATCTCCTAGTCGCTGCTGCCAAGACTGGAAAAATTATCAATATTAAGAAAGGCCAATTTTGTGCTCCCTCTGTCATGGTAAATTCTGCTGAAAAGATCAGATTGGCTGGGAATGAAAATGTGATGGTTTGTGAGAGGGGAACTATGTTTGGCTATAATGATCTGATTGTTGATCCACGCAACTTGGAGTGGATGAGGGAAGCTAATTGTCCTATTGTGGCAGATGTCACACATTCACTACAACAGCCTGCGGGGAGAAAACTGGAAGGCGGAGGTGTTGCCAGTGGAGGTCTTCGTGAATTGATACCATGCATTGCGAGGACAGCAGTTGCTGTTGGAGTGGATGGAATTTTCATGGAGGTGCACAATGATCCTCTAAATGCTCCAGTCGACGGTCCAACACAATGGCCTCTACGCCATTTGGAGGAACTGCTGGAAGAGCTTGTGGCAATAGCTAGGGTAAGCAAGGGGAAGCAACGCTTCAACATTGATCTCACACCAGTCCATGATTAA 873 0.4513 MDSSTMLYNQLKSSEPFFLLAGPNVIESEEHIMYMAKAIKSLTSKFGLKLVFKSSFDKANRTSSKSFRGPGMIEGLKILEKVKVAYDIPIVTDVHEIEQCEPVGRVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMVNSAEKIRLAGNENVMVCERGTMFGYNDLIVDPRNLEWMREANCPIVADVTHSLQQPAGRKLEGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHNDPLNAPVDGPTQWPLRHLEELLEELVAIARVSKGKQRFNIDLTPVHD* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1396 290 Pfam DAHP synthetase I family 15 266 IPR006218 GO:0009058
Vvi19g1396 290 NCBIfam 3-deoxy-8-phosphooctulonate synthase 16 276 IPR006269 GO:0005737|GO:0008676
Vvi19g1396 290 Hamap 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 11 278 IPR006269 GO:0005737|GO:0008676
Vvi19g1396 290 Gene3D Aldolase class I 5 284 IPR013785 -
Vvi19g1396 290 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1 288 IPR006269 GO:0005737|GO:0008676
Vvi19g1396 290 SUPERFAMILY Aldolase 12 277 - -