Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1388 ATGCAGACTGAGCTTCAGAGTGAGTCGTTTGATTACCGGACGGAGCTTCTGTCGCCAGCGCTGCCCGGAGAGAACGGGAGTGCGATGAGGGTGCCGTCGTGGCGAATCAATTTTGAGGAGTTTCAGGTTGCGGAGAAACAGAAGGATTCCAATTTTGGTGTGGCGAAGCTTGTGAAGACGATAAGAAAGCAGAAGAAGCTCGCAGACTATTACAAGAAGCAGGGGAAGCTACTGGAAGGGTTCAATGAAGTGGACGCCTTCACTGAATTGGGCGTCTTGCCTGGGAGTTTAACCGAGGATGAAATGAAGCAGCTTGCAAACAATGAGAGGCTGGCAATTCAGGCATCCAACATAGCAAACATGGTTCTCTTCATAGCAAAAGTGTATGCTTCGGTTGAGAGCAGGTCACTGGCGGTGATAGCATCCACCCTTGACTCTCTCTTGGATCTTTTATCCGGCTTTATTTTGTGGTTTACTGCTTCTGCTATGAGAAAACCAAACCAATATCAATATCCTATTGGGAAGAAGAGGATGCAACCTGTGGGAATCGTTGTTTTTGCATCGGTGATGGCTACTCTTGGATTACAAATATTGTTTGAATCTGGTCGGGAACTTATTATAAAGGCTCAACCTGACAGGGATCCTGTGAAAGAACGATGGATGATTGGGATAATGGTCTCAGTTACAGTGATAAAATTTGCACTCATGACATATTGTCGCAGATTCAAGAACGAAATTATTAGGGCATATGCTCAAGATCATTTCTTTGATGTCATTACCAACTCAATAGGTTTGGTAACTGCAGTCCTAGCCATTCACTTCTTCTGGTGGATTGATCCTCTTGGGGCCATCCTCATAGCTCTGTATACTATGGCTACTTGGGCTAAGACGGTTATGGAGAACGTGTGGTCATTGATTGGGCGAACAGCACCGCCGGAGTTCTTAGCAAAGCTAACATATCTAATATGGAACTATCACGAGGAGATCAAACATATTGACACTGTCAGGGCGTATAACTTTGGCTCCCAATACTTTGTGGAGGTTGATATAGTTGTGCCAGAGGACATGTCTCTAACTCAAGCGCACAACATCGGAGAGGCACTCCAAGAGAAGCTTGAGCAACTTCCGGAGGTGGAAAGAGCCTTTGTTCATATAGACTTTGAATACACTCATAAGCCTGAGCACATGCCCAAAAAGTGTTGA 1203 0.453 MQTELQSESFDYRTELLSPALPGENGSAMRVPSWRINFEEFQVAEKQKDSNFGVAKLVKTIRKQKKLADYYKKQGKLLEGFNEVDAFTELGVLPGSLTEDEMKQLANNERLAIQASNIANMVLFIAKVYASVESRSLAVIASTLDSLLDLLSGFILWFTASAMRKPNQYQYPIGKKRMQPVGIVVFASVMATLGLQILFESGRELIIKAQPDRDPVKERWMIGIMVSVTVIKFALMTYCRRFKNEIIRAYAQDHFFDVITNSIGLVTAVLAIHFFWWIDPLGAILIALYTMATWAKTVMENVWSLIGRTAPPEFLAKLTYLIWNYHEEIKHIDTVRAYNFGSQYFVEVDIVVPEDMSLTQAHNIGEALQEKLEQLPEVERAFVHIDFEYTHKPEHMPKKC* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1388 400 Gene3D Cation efflux protein transmembrane domain 111 305 IPR027469 -
Vvi19g1388 400 FunFam Metal tolerance protein 11 308 388 - -
Vvi19g1388 400 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 39 396 - -
Vvi19g1388 400 Pfam Dimerisation domain of Zinc Transporter 311 386 IPR027470 -
Vvi19g1388 400 NCBIfam cation diffusion facilitator family transporter 115 386 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vvi19g1388 400 Gene3D Cation efflux protein, cytoplasmic domain 317 399 IPR036837 -
Vvi19g1388 400 Pfam Cation efflux family 115 305 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vvi19g1388 400 SUPERFAMILY Cation efflux protein transmembrane domain-like 108 307 IPR027469 -
Vvi19g1388 400 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 310 386 IPR036837 -
Vvi19g1388 400 FunFam Metal tolerance protein 11 112 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1388 Vvi-Chr19 23087103 23089747 Dispersed/Transposed