Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1374 ATGGAGTCACCGTTCAAAGCAGATGTACTGAAAGGGAAAGTGGCCCTTCTCACAGGAGGAGGATCGGGAATTGGGTTCGAGATATCCACCCAATTTGGGCTCCATGGAGCCTCCATCGCCATCATGGGTCGCCGCAAGCAAGTCCTTGACTCCGCCGTGTCAGGCCTCTGTTCCCAAGGAATTCCGGCTGTTGGATTTGTGGGTGATGTTCGCAAGCAGGAAGATGCAAAAAGAGTTGTGGAATCAACTGTCAAGCATTTTGGCAGGCTTGACATTCTTGTGAATGCTGCAGCTGGCAATTTTCTTGTCTCATCTGAGGATTTGTCCCCAAATGGGTTTCGAACAGTTATGGATATTGATTCTGTCGGTACATTTACTATGTGCCACGAAGCACTCAAGTATCTTAAGAAAGGAGGACCAGGAAGGAGCTTTTCTAGTGGTGGATCGATATTGAATATAAGTGCTACTTTGCATTATACAGCAGCTTGGTATCAAATCCATGTATCTGCAGCCAAGGCAGCGGTTGATGCCACAACTAGAAACTTGGCACTGGAATGGGGGACCGACTATGATATCAGAGTTAACGGGATTGCACCAGGCCCCATCGGTGATACTGCTGGCATGAGTAAACTTGCACCTGAAGAGATCAGCAATAAAGCTAGAGAGATTATGCCTCTGTATAAACTTGGGGAGAAATGGGATATCGCCATGGCTGCTCTCTACCTGGCTTCTGATGCTGGTTGGTAA 747 0.4766 MESPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQGIPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAALYLASDAGW* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1374 248 CDD TER_DECR_SDR_a 10 247 - -
Vvi19g1374 248 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Vvi19g1374 248 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Vvi19g1374 248 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Vvi19g1374 248 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Vvi19g1374 248 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Vvi19g1374 248 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Vvi19g1374 248 Pfam Enoyl-(Acyl carrier protein) reductase 22 246 - -
Vvi19g1374 248 Gene3D - 2 248 - -
Vvi19g1374 248 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 246 IPR036291 -
Vvi19g1374 248 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 2 247 IPR045017 GO:0008670|GO:0009062
Vvi19g1374 248 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Vvi19g1374 248 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Vvi19g1374 248 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1374 Vvi-Chr19 22887412 22896568 Transposed