Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1368 ATGACAGTGGGAGAGGCTTTTCTCTCAGCTTTTCTTCAAGTTCTATTTGACAGGTTGGCTTCTCGTGAGTTCGTGGAGCTGCTACGTGGCCGGAAACTGGATGAGGTGCTGGAGAAGTTGAAGATAACTCTGCTGATGATCACTGCTGTGCTGAATGATGCTGAGGAGAAGCAGTTCAGCAGCCCAGCAGTGGAGAAGTGGCTGCACATGGCCAAAGATGCTCTGTATGATGCAGAGGACGTATTGGATGAGCTAGCTACCGATGCTCTGCAGTCTAAGCTGGAAGGTGAATCTCAGAACGGAAAGAATCCGGTACGCAATAGGAGTTTCATTCCCACCTCTGTTAATTTGTTCAAGGAAGGAATAGAATCAAAGATAAAGAAGATAATTGACAAGTTAGAAAGTATTTCCAAACAAAAGGATGTCCTCGGCTTGAAGGATAATGTTGCGGGGAGTTTATCAGAAATCAAACACCGATTACCAACAACTTCGCTGGTGGAAAAATCTTGTGTCTATGGCAGGGATGACGATGAGAAGCTGATAATTGAAGGGCTACTAAGAGATGAACTCAGCAACGCTAAAGTTGGGGTAGTTCCCATAGTTGGTATGGGCGGGATAGGGAAGACAATCCTGGCTCAACTTGTGTACAACAATGGCAGAGTGGAGAAGCGTTTTGCTTTAAGAATCTGGGTTTGTGTTACTGATCAGTTTGATGTGATGAGGATAACAAAAACATTGGTTGAGTCAATCACTTCGAAAACTCCTGAGGTCAATGACTTAAACTTGCTTCAAGTTAGCCTGAGAGATAAAGTGGTTGGGCATCGGTTTTTGCTTGTTTTGGATGATGTTTGGAGCAAGAGAAATAAGGGCTGGGATTTGCTCTTGAATCCTTTAAGAGCAGGAGCACCAGGAAGTAAGATTATAGTAACAACACGCAATGCAGATGTTGCATCAAGCATAGGCACAGTTCCGGCTCATCATCTGAAAGGTCTATCATTTGAAGATTGTTGGTCATTGTTCAAGAGTCAAGCATTTGAAGATAGGAACATTGATGCTCACCCCAATTTGGAAGTGATTGGTAGGGAGATAGTGAAAAAATGTGATGGTTTGCCACTGGCAGCAAAGAGGTTGGGGGTCCTTTTGCGCACGAGAGTAGAAGAACATGAATGGAGGGATATTTTGAATAAAAAGATATGGGATTTACCAGATGATGAAAGGGAAATCCTTCAGACTCTAAGATTGAGCTATGATCATCTTCCTGCACATTTGAAGCAGTGCTTTGCCTACTGTGCGATATTCCCAAAAGACTACGAATTCAAGAAGGACTCGCTAGTTCTATTATGGATAGCAGAAGGTTTTGTGCAACAACCAAAAGGGAATAAAAGATTGGAAGAGGCAGGGGGTGAATATTTTCAGGATCTAGTATCAAGGTCATTCTTTCAGCAATCCTCTAATGATAAATCATGTTTTGTAATGCATGACCTCATGAAAGACTTAGCTCAGTTTGTTTCACGAGATATATGTTTCAGATTGGAGGATATGCTGAAAGATGGAAATCCATGTAAAGTCTTTGAAAAGGCCCGCCATTCCTCTTACATTCGTGGAAAACGCGATGTTCTCACTAAATTTGAGGCCTTCAATGGACTCGAGTGCTTACGGTCCTTCCTACCACTGGATCCAATGGGCAAAACTGGAGTCAGCTATTTGGCCAATAAGGTTCCTAGCGATCTCTTGCCAAAGTTGAGATGTTTACGGGTTCTATCTTTCAATGGTTATCGCATCACTGAATTGCCGGATTCAATTGGCAACTTGAGACATTTAAGGTACTTGGACCTTTCTCACACTGCAATTAAGTACTTGCCTGAATCAGCAAGTACTCTCTACAATTTACAAGCATTAATCTTGTTACAGTGTCACTCTCTCAGTATGTTACCTACAAACATGGGTAACCTAACAAACCTACGGCATCTATGCATTAGTGAAACCAGATTAAAAATGATGCCACTGCAAATGCATAGATTGACGAGTCTACAAACTCTCTCTCATTTTGTGGTGGGCAAAAATGGTGGGTCGGGAATAGGAGACCTGAGGAACATGTCGCATCTTCAGGGAAAGCTTCTCATGACAGGGCTGCAGAATGTGGCTAGTTTTTGGGATGCAGCAGAGGCTAAATTAAAGGACAAACATGAAATTGATGAGCTGGTGTTCCAATGGAGTAACAATTTTGATGATCTAACAAATGATAGGGTTGAAGAGGAAGTATTTGACAAGATCAATGTTAGAGGCCATAGGGTGACCAGATTTCCAAGTTTTAGGGAAGTCATGCAGGCATATGAGCAGGAACATGATGAAACACCGTCAGAACAGAGTGGTAATTTAGATGATTCCAGACATGGAAGAGTTGACACTGACGTACTTGAGATGCTGCAACCTCATAACAACATAAAACAACTTGTGATCAAAGACTACAGAGGAACAAGATTTCCAGGCTGGATAGGAAATGCTTCCTACTCCAATATAATACGTTTAAAACTTAGCAACTGTAAAAAGTGTAAGTGTTTACCATCACTTGGGCAGCTACCGTCGCTCAAATACCTGACTATCAAAGGAATGGAAGGAATCAAGATGGTGGGCACCGAATTCTACAAGGATGGATGTTCTTCTCTTGTGCCGTTTCCATCATTGGAGACTTTGAAGTTTGAGAACATGTTGGAGTGGGAGGTATGGTCTTCCTCTGGACTTGAAGACCAGGAAGACTTCCATCACCTGCAAAAGATTGAAATCAAGGATTGTCCCAAGCTTAAAAAATTCTCACATCATTTCCCTTCCTTGGAAAAAATGAGCATTTTGCGGTGTCAACAGTTGGAAACACTTTTAACAGTTCCAACACTTGATGATAGCACAGAACAAGGCGGATACTTCCCTTGCCTCCTAGAGCTTTCTATAAGAGCATGTCCCAATCTGAGGGAATTACCCAACCTCTTTCCGTCCTTAGCGATACTTGATATAGATGGATGCCTAGAATTGGCAGCACTTCCAAGGCTTCCTTTGATCCGTGAACTAGAATTAATGAAATGTGGTGAAGGGGTGTTACAAAGTGTAGCGAAATTCACATCGCTTACCTATTTGCATCTGAGTCATATTTCCGAGATCGAGTTTCTACCTGAAGGGTTCTTCCACCACTTGACAGCACTCGAAGAATTGCAGATTTCTCATTTCTGCAGGCTCACAACCCTGTCCAATGAGATTGGATTGCAAAACCTTCCTTACCTAAAACGTTTGAAAATTTCAGCCTGTCCATGTTTAGAGGAGTTGCCACAAAACTTGCACAGTCTTGTATCTCTGATAGAGTTGAAGGTCTGGAAGTGCCCCCGTCTTGTATCCTTCCCAGAGTCAGGCTTTCCTTCTATGCTTAGAATTCTTGAGATTAAGGATTGTGAGCCTCTGGAGAGCCTACCTGAGTGGATAATGCATAACAACGATGGCAACAAGAAGAACACCATGTCTCATCTCCTTGAATACTTTGTGATTGAAGGCTGTTCTACCCTTAAATGCTTACCAAGAGGCAAGCTTCCCAGCACACTCAAAAAACTTGAAATCCAGAACTGTATGAATCTGGATTCCCTTCCTGAGGACATGACTTCTGTTCAATTTTTGAAGATTTCAGCCTGTTCAATTGTGTCCTTTCCAAAAGGTGGATTACATACAGTTCCATCCTCCAATTTCATGAAGCTTAAGCAACTGATTATCAACAAGTGTATGAAGCTTGAATCCCTACCTGAAGGTCTACATAACCTCATGTATCTTGATCACTTGGAAATAGCAGAATGCCCGCTACTGTTCTCTTTCCCAGGACCTGGGTTGCCCACAACCAAGCTACGAACACTTAAAATCTCCAATTGCATCAATTTCAAGTCCCTACCAAATCGGATTTACAACCTCACATCTCTTCAAGAGCTATGCATAGATGGGTGCTGTAGTCTTGCATCACTTCCAGAGGGGGGATTACCCAACAGTCTAATATTACTTTCTATCTTAGATTGCAAGAATCTCAAGCCCTCCTATGACTGGGGACTGCACAGGCTCACATCTCTCAACCACTTCTCCTTTGGAGGATGTCCAGATTTAATGTCACTTCCAGAGGAGTGGCTGCTGCCTACCACCATATCCTCTGTTCACCTTCAATGGCTGCCAAGACTGAAGTCCCTACCCAGGGGCCTGCAGAAACTTAAATCTCTAGAAAAACTAGAGATATGGGAATGTGGCAACCTCTTAACCTTGCCGGAGGAGGGACAATCCAAGATGCAGTGGAATCTTCAATTTTGGGATGTCCTCTAG 4338 0.4272 MTVGEAFLSAFLQVLFDRLASREFVELLRGRKLDEVLEKLKITLLMITAVLNDAEEKQFSSPAVEKWLHMAKDALYDAEDVLDELATDALQSKLEGESQNGKNPVRNRSFIPTSVNLFKEGIESKIKKIIDKLESISKQKDVLGLKDNVAGSLSEIKHRLPTTSLVEKSCVYGRDDDEKLIIEGLLRDELSNAKVGVVPIVGMGGIGKTILAQLVYNNGRVEKRFALRIWVCVTDQFDVMRITKTLVESITSKTPEVNDLNLLQVSLRDKVVGHRFLLVLDDVWSKRNKGWDLLLNPLRAGAPGSKIIVTTRNADVASSIGTVPAHHLKGLSFEDCWSLFKSQAFEDRNIDAHPNLEVIGREIVKKCDGLPLAAKRLGVLLRTRVEEHEWRDILNKKIWDLPDDEREILQTLRLSYDHLPAHLKQCFAYCAIFPKDYEFKKDSLVLLWIAEGFVQQPKGNKRLEEAGGEYFQDLVSRSFFQQSSNDKSCFVMHDLMKDLAQFVSRDICFRLEDMLKDGNPCKVFEKARHSSYIRGKRDVLTKFEAFNGLECLRSFLPLDPMGKTGVSYLANKVPSDLLPKLRCLRVLSFNGYRITELPDSIGNLRHLRYLDLSHTAIKYLPESASTLYNLQALILLQCHSLSMLPTNMGNLTNLRHLCISETRLKMMPLQMHRLTSLQTLSHFVVGKNGGSGIGDLRNMSHLQGKLLMTGLQNVASFWDAAEAKLKDKHEIDELVFQWSNNFDDLTNDRVEEEVFDKINVRGHRVTRFPSFREVMQAYEQEHDETPSEQSGNLDDSRHGRVDTDVLEMLQPHNNIKQLVIKDYRGTRFPGWIGNASYSNIIRLKLSNCKKCKCLPSLGQLPSLKYLTIKGMEGIKMVGTEFYKDGCSSLVPFPSLETLKFENMLEWEVWSSSGLEDQEDFHHLQKIEIKDCPKLKKFSHHFPSLEKMSILRCQQLETLLTVPTLDDSTEQGGYFPCLLELSIRACPNLRELPNLFPSLAILDIDGCLELAALPRLPLIRELELMKCGEGVLQSVAKFTSLTYLHLSHISEIEFLPEGFFHHLTALEELQISHFCRLTTLSNEIGLQNLPYLKRLKISACPCLEELPQNLHSLVSLIELKVWKCPRLVSFPESGFPSMLRILEIKDCEPLESLPEWIMHNNDGNKKNTMSHLLEYFVIEGCSTLKCLPRGKLPSTLKKLEIQNCMNLDSLPEDMTSVQFLKISACSIVSFPKGGLHTVPSSNFMKLKQLIINKCMKLESLPEGLHNLMYLDHLEIAECPLLFSFPGPGLPTTKLRTLKISNCINFKSLPNRIYNLTSLQELCIDGCCSLASLPEGGLPNSLILLSILDCKNLKPSYDWGLHRLTSLNHFSFGGCPDLMSLPEEWLLPTTISSVHLQWLPRLKSLPRGLQKLKSLEKLEIWECGNLLTLPEEGQSKMQWNLQFWDVL* 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1368 1445 SUPERFAMILY L domain-like 980 1421 - -
Vvi19g1368 1445 Gene3D - 330 420 IPR042197 -
Vvi19g1368 1445 Pfam Rx N-terminal domain 7 99 IPR041118 -
Vvi19g1368 1445 Gene3D Ribonuclease Inhibitor 733 958 IPR032675 -
Vvi19g1368 1445 Gene3D Ribonuclease Inhibitor 1192 1337 IPR032675 -
Vvi19g1368 1445 Gene3D Ribonuclease Inhibitor 1338 1438 IPR032675 -
Vvi19g1368 1445 Gene3D Ribonuclease Inhibitor 1018 1191 IPR032675 -
Vvi19g1368 1445 Coils Coil 37 57 - -
Vvi19g1368 1445 Gene3D - 153 323 IPR027417 -
Vvi19g1368 1445 Gene3D - 11 139 - -
Vvi19g1368 1445 Pfam NB-ARC domain 188 417 IPR002182 GO:0043531
Vvi19g1368 1445 PRINTS Disease resistance protein signature 197 212 - -
Vvi19g1368 1445 PRINTS Disease resistance protein signature 270 284 - -
Vvi19g1368 1445 PRINTS Disease resistance protein signature 367 381 - -
Vvi19g1368 1445 PRINTS Disease resistance protein signature 602 618 - -
Vvi19g1368 1445 SMART LRR_typ_2 1037 1061 IPR003591 -
Vvi19g1368 1445 SMART LRR_typ_2 604 627 IPR003591 -
Vvi19g1368 1445 SMART LRR_typ_2 1062 1086 IPR003591 -
Vvi19g1368 1445 SMART LRR_typ_2 581 603 IPR003591 -
Vvi19g1368 1445 SMART LRR_typ_2 651 674 IPR003591 -
Vvi19g1368 1445 FunFam Probable disease resistance protein At1g63360 416 502 - -
Vvi19g1368 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 430 IPR027417 -
Vvi19g1368 1445 Coils Coil 119 139 - -
Vvi19g1368 1445 Gene3D Ribonuclease Inhibitor 546 732 IPR032675 -
Vvi19g1368 1445 Gene3D - 421 501 IPR036388 -
Vvi19g1368 1445 PANTHER DISEASE RESISTANCE PROTEIN RP 37 936 IPR044974 GO:0006952
Vvi19g1368 1445 SUPERFAMILY L domain-like 488 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1368 Vvi-Chr19 22805633 22809970 Dispersed/Transposed