Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1364 ATGGCTTGGAGCTTCACACCGGATGGTCTCATGGCTTTGAATTTTCCTTCCTTCCATCCCCAAAATTCCCCTCAGTTTCTCTCTTCCCAAACAAAACTTCGCCCATTTTCCTTCCGTTTTTCTCTTCCCAAAAACCAGAAGCCAAGAGCCCTGCGAGAATGGCGGGAGTACGAAGATGCCGTGAAGGAGAAAGACCTCGCTCGAGCCCTTCGGTTCTTGAAATCCGTGGAGACCAATCCAATCGAGCCATTCAACGATTCTTCTTCTTCGGATCTGGGGTTGGTTCAATCGGAGAGGGATTGGGAGGTTCTGGACGCCTGTTTGAATGCAGATGATATGAAGCTTGTTGGGAGCGCCTATTCGTTCCTCAAGAACAGAGGCTTCTTGCCCAATTTCGGAAAATGCAGAAATATTGTTTTGGAGGGATCAAGAGATGTTACGCCAACTGTGTTGAAGACTTCAACTGGTTTAGAAGTGTCTAAACTTTCACCAAAAAAATGGGGTCTTTCGGGAGGCTCAAGTGCTGCTTTAGCAGCTTTTCTTGGTGGGGTATCTCTTCTTCTTTCTCGAGGGATCGATATCAGACCTAACCTTGCAGCCATACTTGGTCTTGCTATCATAGATGCTGTCTTCCTCGGTGGTTCTTGTTTAGCTCAAATTTCAAGTTATTGGCCTCCATATAGGCGTCGGATCCTAGTTCATGAAGCAGGCCATCTGCTGACTGCTTACCTTATGGGTTGCCCAATTCGTGGGGTGATTTTAGACCCAATAGTTGCAATGCAAATGGGCATTCAAGGCCAGGCAGGGACTCAATTTTGGGATGAGAAACTGGAAAAAGAGTTAGCTGAAGGCCGCCTAAGTGGTACTACCTTTGACCGATACTGTATGGTCCTTTTTGCTGGAATTGCAGCTGAAGCTCTTGTTTATGGTGAGGCCGAGGGTGGAGAAAATGATGAGAACTTGTTCAGGAGCATTTGCGTTCTTCTGCGACCTCCATTAACTATTGGACAGATGTCAAATCAGGCAAGATGGTCAGTTCTGCAGTCCTACAACCTGCTCAAATGGCACAAACATGCCCACCGAGCTGCTGTCAAAGCTCTAGAGAGCGGTGGCAGTCTGAGTGTTGTCATCAGGAGGATCGAGGAAGCCATGTCTTCCAGTAGGTGA 1167 0.4747 MAWSFTPDGLMALNFPSFHPQNSPQFLSSQTKLRPFSFRFSLPKNQKPRALREWREYEDAVKEKDLARALRFLKSVETNPIEPFNDSSSSDLGLVQSERDWEVLDACLNADDMKLVGSAYSFLKNRGFLPNFGKCRNIVLEGSRDVTPTVLKTSTGLEVSKLSPKKWGLSGGSSAALAAFLGGVSLLLSRGIDIRPNLAAILGLAIIDAVFLGGSCLAQISSYWPPYRRRILVHEAGHLLTAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKLEKELAEGRLSGTTFDRYCMVLFAGIAAEALVYGEAEGGENDENLFRSICVLLRPPLTIGQMSNQARWSVLQSYNLLKWHKHAHRAAVKALESGGSLSVVIRRIEEAMSSSR* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1364 388 Gene3D Peptidase M41 222 376 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Vvi19g1364 388 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE-RELATED 59 386 - -
Vvi19g1364 388 SUPERFAMILY FtsH protease domain-like 224 373 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Vvi19g1364 388 FunFam ATP-dependent zinc metalloprotease 223 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1364 Vvi-Chr19 22763855 22769558 Dispersed