Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g1303 | ATGGCTGGTCTGTTGCCTGGCGATCCGTCACATCATGGAATGTATGAAGGTGGGTCTTACAAATTTCCTCAGGACAAACCAGAGGAAGGTGGCCGTTGGTACTTATCTAGGAAGGAAATTGAAGAAAATTCCCCTTCCAAGCGTGATGGAATTGATTTGAAAAAAGAGACTTACCTACGCAAGTCGTACTGTACATTTCTACAGGATTTGGGCATGAGGCTCAAAGTGCCCCAGGTAACAATTGCTACAGCAATCATATTTTGTCACCGTTTCTTCCTTCGTCAATCCCATGCAAAGAATGACAGAAGGACAATTGCAACAGTGTGTATGTTTCTTGCGGGGAAGGTTGAAGAAACTCCCCGTCCATTAAAAGATGTTATCCTTGTTTCTTATGAAATCATTAATAAAAAGGATCCTGCTGCAGTTCAAAGGATAAAGCAGAAGGAGGTATATGAACAGCAGAAGGAATTAATTTTACTTGGAGAGAGGGTTGTACTTGCTACACTTGGTTTTGATCTTAATGTGCACCATCCATATAAACCCCTTGTAGAGGCAATAAAGAAATTCAAGGTTGCTCAAAATGCCCTTGCTCAAGTTGCTTGGAATTTTGTCAATGATGGACTGCGGACATCTCTTTGCTTGCAATTTAAGCCCCACCACATTGCGGCAGGTGCAATTTTCCTTGCTGCCAAGTTCCTCAAAGTAAAGCTCCCATCAGATGGTGAGAAGGTCTGGTGGCAGGAGTTCGATGTCACCCCACGCCAATTAGAGGAGGTCAGTAATCAAATGTTGGAGCTCTACGAACAAAATCGAGTGCCACCTTCTCAAGGCAGTGAAGTTGAAGGAAGTGTTGGAGGTGGGGCTGCTCATCGGGCCACATCAAAAGCTCCAGCTGCTAATGAAGAATATGTAATGAGTAATGCTCATGGTGGGGGAACTCCATTGAAACCTGCAACCTCAAAGCCAGTAGCATCTAAGCCAGCATCTGATCAGCCATATGTTGATAATATTAGTGGACCTTCAAGAACCAGCCAAAATCGAAGTAATGACTATGGAAGCACGGAGATGAGAAGTGCTTCAGACCACAAGGCTGATGGAGAATCAAGTGATTATCATGAACATGAACCATCACTTTACCAGGAGAACTTGGGGGAAGGTCAAAATGCGTCAAGGCATGGGTCAGAGGGGCCTGGTGAAGATGATCAAGAAAGGACTGGTGGGAGAAGTGAAGCAAGAGAAGCAGGGGAATTGAAGGACAAGTACCATGGTCGAAATCTGGAATATAGAGATGGCCTGCTCGGCCAATCACCCCAGGAAGCTATTAAAAAGATTGATAAAGACAAGGTAAAGGCTGCACTGGAGAAAAGAAGGAAAACTCGTGGTGACATGACTAGAAAAACAGACCTGATGGATGAGGATGATCTTATCGAGAGAGAACTGGAAGATGGTATCGAGTTGGCCGTTGAGACTGAGAAAACCAAGCGGGAGAGGAGGCAAAGCTGGCCCAAACCCTCCAACAGGCCAGAACATGAGAGCTCACACCATGGGAAGCATCAAGATGATGAAGATGGACACCACCAAGGACTGAAACCCCTGTCATCACGAGGATCAGATTTGGAGAATGTGGAGGAAGGTGAGGTATCTGCATTTGATGACGCTGACCGAGCATTTCGATCACCCAAGTCAAGCAGTCGAAAGAGGAAACCGGGAAGCTCACCAGAAAAACTCTCAGATGGAAAGCAGCGGCATGATTATATGCCTGGCTCCCACCACCATAACCATCATGATTTCCCAGAAGATCGGAACAGACTCGGCCGGCTTGGTTACTCAGAGAGGGATCACAAAAGGCATGCACAGGAAAATCATGTCTGA | 1872 | 0.4578 | MAGLLPGDPSHHGMYEGGSYKFPQDKPEEGGRWYLSRKEIEENSPSKRDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIINKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGSVGGGAAHRATSKAPAANEEYVMSNAHGGGTPLKPATSKPVASKPASDQPYVDNISGPSRTSQNRSNDYGSTEMRSASDHKADGESSDYHEHEPSLYQENLGEGQNASRHGSEGPGEDDQERTGGRSEAREAGELKDKYHGRNLEYRDGLLGQSPQEAIKKIDKDKVKAALEKRRKTRGDMTRKTDLMDEDDLIERELEDGIELAVETEKTKRERRQSWPKPSNRPEHESSHHGKHQDDEDGHHQGLKPLSSRGSDLENVEEGEVSAFDDADRAFRSPKSSSRKRKPGSSPEKLSDGKQRHDYMPGSHHHNHHDFPEDRNRLGRLGYSERDHKRHAQENHV* | 624 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g1303 | 623 | PIRSF | Cyclin_L | 478 | 622 | - | - | |
| Vvi19g1303 | 623 | PIRSF | Cyclin_L | 31 | 485 | - | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 394 | 427 | - | - | |
| Vvi19g1303 | 623 | FunFam | Cyclin-T1-5 like | 23 | 173 | - | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 271 | 623 | - | - | |
| Vvi19g1303 | 623 | CDD | CYCLIN_AcCycT_rpt1 | 49 | 172 | - | - | |
| Vvi19g1303 | 623 | Gene3D | - | 175 | 279 | - | - | |
| Vvi19g1303 | 623 | Pfam | Cyclin, N-terminal domain | 34 | 174 | IPR006671 | - | |
| Vvi19g1303 | 623 | Gene3D | - | 24 | 173 | - | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 567 | 623 | - | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 440 | 473 | - | - | |
| Vvi19g1303 | 623 | FunFam | Cyclin-T1-5 like | 175 | 279 | - | - | |
| Vvi19g1303 | 623 | SUPERFAMILY | Cyclin-like | 176 | 272 | IPR036915 | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 537 | 560 | - | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 356 | 379 | - | - | |
| Vvi19g1303 | 623 | SUPERFAMILY | Cyclin-like | 31 | 175 | IPR036915 | - | |
| Vvi19g1303 | 623 | PANTHER | CYCLIN | 32 | 344 | IPR043198 | GO:0006357|GO:0016538 | |
| Vvi19g1303 | 623 | CDD | CYCLIN_AcCycT_rpt2 | 176 | 268 | - | - | |
| Vvi19g1303 | 623 | SMART | cyclin_7 | 65 | 167 | IPR013763 | - | |
| Vvi19g1303 | 623 | SMART | cyclin_7 | 180 | 265 | IPR013763 | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 331 | 355 | - | - | |
| Vvi19g1303 | 623 | MobiDBLite | consensus disorder prediction | 481 | 529 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi19g1303 | Vvi-Chr19 | 21934772 | 21949752 | Dispersed |