Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1296 ATGCATGATGTCATTCGTGATATGGCTTTGTGGATAGCTTGTGAAAATGGGAAGAAGAAGAACAAATTTGTGGTAAAAGAGCAAGTTGAATTGATTAAAGGCCATGAAATTACAAAATGGAAGAACGCACAAAGGATATCAGTTTGGAATAGTGGTATCGAAGAACGCATGGCACCACCACCTTTTCCTAATCTTGAGACTCTGTTGTCAGTGGGTGGATTGATGAAGCCATTTCTAAGTGGGTTCTTTAGATATATGCCTGTCATAAGAGTGTTGGCCTTGGTAGAAAACTATGAACTGACGGAGTTACCTGTGGAGATTGGTGAATTGGTTACATTGCAGTATCTTAATTTATCACTCACGGGAATAAAAGAGTTACCAATGGAGCTTAAGAAATTGACAAAACTGAGGTGCTTGGTATTGGATGACATGCTTGGACTTAAAACAATTCCACATCAAATGATATCAAGTCTTTCATCTTTGGAATCGTTCAGTTTTTACAATTCTGGAGCCACCATTGGAGATTGCAGTGCCTTATTAGAGGAGTTAGAGAGCTTGGAACACCTGAACGAGATATTCATCACACTTAGAAGTGTCACTCCTGTAAAAAGATTACTGAACTCTCACAAGTTACGAAGGGGCATAAATCGGCTACATGTAGAATCCTGCAACCACCTGAGCTCACTCAATGTGTACCCTTATCTGCAGAAACTTGAAATAAACATATGTGATGACTTGGAAGATGTGAAATTCATTGTGGAAAAGGAAAGGGGTGGGGGATTTGCAGCATATAATGTGGTCCAATCAAACATGGCAAAGCACCAAAACTTCTGCTATCTTCGTCATGTAGCGATATGTCATTGTCCAAAATTATTGAACTTAACATGGTTTATTTATGCTACACGCCTTCAATTCCTTAATGTTAGTTTCTGTGATTCAATGGAAGAAGTGGTAGAAGATAAAAAGAATGGAGTTTCAGAAATTCAGCAAGAGTTAGGCCTATTCTCAAGACTCGTATCTCTCCATTTGTCTTGTCTACCAAATCTAAGGAGAATATATAGAAGGCCTCTACAATTTCCTTCCCTAAAAGAGATGACTGTTAAATACTGTCCAAATCTGGGGAAGCTGCCATTTGATTCCAAAGCTGGGATTAGTAACAGTTTACAGAAGATCCATGGAGCCCAGGAATGGTGGGATGGGCTAGAGTGGGAGGACCAAACCATTATGCAAAACCTCATCCCATACTTCGTTCCGATTCTGGTCTTCGCGATCACGATTGAGGTGTGA 1287 0.3986 MHDVIRDMALWIACENGKKKNKFVVKEQVELIKGHEITKWKNAQRISVWNSGIEERMAPPPFPNLETLLSVGGLMKPFLSGFFRYMPVIRVLALVENYELTELPVEIGELVTLQYLNLSLTGIKELPMELKKLTKLRCLVLDDMLGLKTIPHQMISSLSSLESFSFYNSGATIGDCSALLEELESLEHLNEIFITLRSVTPVKRLLNSHKLRRGINRLHVESCNHLSSLNVYPYLQKLEINICDDLEDVKFIVEKERGGGFAAYNVVQSNMAKHQNFCYLRHVAICHCPKLLNLTWFIYATRLQFLNVSFCDSMEEVVEDKKNGVSEIQQELGLFSRLVSLHLSCLPNLRRIYRRPLQFPSLKEMTVKYCPNLGKLPFDSKAGISNSLQKIHGAQEWWDGLEWEDQTIMQNLIPYFVPILVFAITIEV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1296 428 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1 375 - -
Vvi19g1296 428 Coils Coil 311 331 - -
Vvi19g1296 428 Gene3D Ribonuclease Inhibitor 62 321 IPR032675 -
Vvi19g1296 428 Gene3D Ribonuclease Inhibitor 322 390 IPR032675 -
Vvi19g1296 428 SUPERFAMILY L domain-like 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1296 Vvi-Chr19 21852033 21853319 Tandem