Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1295 ATGGGGGGTGTGGGCAAAACCACCCTCTTGAACAGGATCAACAATGAGTTCCTCAAATCCAGGGTTGGGTTTGACGCAGTGATTTGGGTGACTGTGTCCAGACCAGCAAATGTGGAGAAGGTTCAGCAAGTTCTTTTCAATAAATTGGAGATTCCTAGTAACAACTGGGAAGGTAGAAGTGAGGATGAAAGGAAAGAAGCAATATTCAATGTCTTGAAGATGAAGAAAATTGTCGCCTTATTAGATGATATATGGGAGCCTCTTGATCTCTTTGCAGTGGGGATACCTCCTGTAAATGATGGAAATAAGTCCAAGGTGGTATTTACAACCCGATTTTCAACTGTGTGCCGAGATATGGGAGCTAAGGGCATTGAAGTGAAGTGCTTAGCATGGGAGGAAGCATTTGCTCTGTTTCAGGCATATGTAGGAGAAGACACTATATATTCTCATCCACATATACCAAAGCTGGCGGAGACTGCTGCCAAAGAGTGCGACGGCCTCCCACTTGCCCTCATCACCATTGGACGAGCAATGGCAGGAACAAAAACGCCTGAGGAATGGGAGAAAAAAATACAAATGTTGAAGAATTATCCAGCAAAGTTTCCAGGTATGGAGAATCATTTGTTTCCACGTTTAGCGTTCAGTTATGATAGCCTACAAGATGAAACAATCAAATCGTGTTTCCTGTATTGCTCTTTATTTCTGGAGGATTATAATATCAATTGTGATGAACTTATACAACTATGGATTGGAGAGGGGTTTCTAGATGAATACGGTGACATAAAAGAAGCAAGAAATGGAGGAGAAGACATTATTGCAAGTTTAAATCATGCATGCCTATTGGAGATTACTGTTACTGATAATATATGGACCCAAGCAAGATGTAGATGTGTGAAGATGCATGATGTCATCCGTGATATGGCTTTGTTGTTAGCTTGTCAAAATGGGAATAAGAAGCAAAACAAATTTGTTGTTGTAGATAAAGGTGAATTGGTTAATGCTCAAGAAGTTGAAAAATGGAAGGGAACACAAAGGTTATCATTAGTCAGTGCTAGTTTTGAAGAACTGATCATGGAACCACCATCTTTTTCTAATCTTCAGACTTTGTTGGTATTTGTTAATTGGACGTTACCATTATCATTTCCAAGTGGATTCTTCTCATATATGCCTATTATAACAGTTCTGGACTTTTCAGACCATGATAATTTAATTGATTTGCCTATAGAAATTGGCAAATTATTTACTTTACAATATCTTAATTTGTCTGGTACAAGGATAAGAACGTTACCAATGGAACTCAGGAATTTTAAAAAACTGAGGTGTTTGTTATTGGATGACTTGTTTGAGTTTGAAATTCCATCTCAAATCATATCAGGTCTTTCATCCTTGCAGTTGTTTAGTGTTATGGATTCCGATGAAGCTACCCGCGGAGATTGTAGAGCCATATTAGATGAGTTAGAGGGGTTGAAATGCATGGGAGAAGTATCCATTAGTCTTGATAGTGTTCTTGCCATCCAAACATTATTGAACTCCCACAAGTTACAAAGGTGCTTGAAACGCTTAGACGTACACAACTGCTGGGATATGGACTTACTTCAACTGTTTTTTCCTTATTTGGAAGTGTTTGAGGTCAGGAATTGTTCAAATTTGGAAGATGTGACGTTCAATTTGGAAAAGGAAGTCCATTCAACATTCCCAAGGCATCAATACTTATACCATCTTGCTCATGTAAGGATAGTATCCTGTGAAAATTTGATGAAATTGACATGTCTTATTTATGCTCCAAATCTTAAGTCTCTATTCATTGAGAACTGTGACTCTTTGGAAGAAGTGATAGAAGTTGACGAGTCTGGAGTTTCAGAAATTGAATCTGACTTGGGCCTGTTTTCAAGACTTACTCATCTCCATTTGCGGATTCTACAAAAGCTAAGGAGTATATGCGGATGGAGCTTACTCTTTCCTTCCTTAAAGGTGATTCATGTGGTTAGATGTCCGAATTTGAGGAAACTACCTTTTGATTCCAACATCGGGATTAGTAAGAATTTAGAGGAAATCGAGGGAGAAGGAGAATGGTGGGACGAGTTAGAGTGGGAGGATCAAACCATTATGCACAACCTCGGTCCATATTTCAAGCCTCTATAG 2142 0.3889 MGGVGKTTLLNRINNEFLKSRVGFDAVIWVTVSRPANVEKVQQVLFNKLEIPSNNWEGRSEDERKEAIFNVLKMKKIVALLDDIWEPLDLFAVGIPPVNDGNKSKVVFTTRFSTVCRDMGAKGIEVKCLAWEEAFALFQAYVGEDTIYSHPHIPKLAETAAKECDGLPLALITIGRAMAGTKTPEEWEKKIQMLKNYPAKFPGMENHLFPRLAFSYDSLQDETIKSCFLYCSLFLEDYNINCDELIQLWIGEGFLDEYGDIKEARNGGEDIIASLNHACLLEITVTDNIWTQARCRCVKMHDVIRDMALLLACQNGNKKQNKFVVVDKGELVNAQEVEKWKGTQRLSLVSASFEELIMEPPSFSNLQTLLVFVNWTLPLSFPSGFFSYMPIITVLDFSDHDNLIDLPIEIGKLFTLQYLNLSGTRIRTLPMELRNFKKLRCLLLDDLFEFEIPSQIISGLSSLQLFSVMDSDEATRGDCRAILDELEGLKCMGEVSISLDSVLAIQTLLNSHKLQRCLKRLDVHNCWDMDLLQLFFPYLEVFEVRNCSNLEDVTFNLEKEVHSTFPRHQYLYHLAHVRIVSCENLMKLTCLIYAPNLKSLFIENCDSLEEVIEVDESGVSEIESDLGLFSRLTHLHLRILQKLRSICGWSLLFPSLKVIHVVRCPNLRKLPFDSNIGISKNLEEIEGEGEWWDELEWEDQTIMHNLGPYFKPL* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1295 713 Gene3D - 216 309 IPR036388 -
Vvi19g1295 713 FunFam Probable disease resistance protein At1g63360 216 310 - -
Vvi19g1295 713 FunFam Probable disease resistance protein At5g66910 128 215 - -
Vvi19g1295 713 Gene3D - 129 215 IPR042197 -
Vvi19g1295 713 FunFam Probable disease resistance protein At1g61300 1 123 - -
Vvi19g1295 713 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1 671 - -
Vvi19g1295 713 Pfam NB-ARC domain 1 217 IPR002182 GO:0043531
Vvi19g1295 713 SUPERFAMILY L domain-like 293 688 - -
Vvi19g1295 713 Gene3D Ribonuclease Inhibitor 327 614 IPR032675 -
Vvi19g1295 713 Gene3D - 1 128 IPR027417 -
Vvi19g1295 713 PRINTS Disease resistance protein signature 592 608 - -
Vvi19g1295 713 PRINTS Disease resistance protein signature 164 178 - -
Vvi19g1295 713 PRINTS Disease resistance protein signature 71 85 - -
Vvi19g1295 713 Gene3D Ribonuclease Inhibitor 615 689 IPR032675 -
Vvi19g1295 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1295 Vvi-Chr19 21839338 21841479 Dispersed/Tandem