Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1281 ATGGCTGGCCAAATTCCATTCGGTGTTGTGGAGCACATTTTGACCAAGTTGGGGTCCAAGGCGTTTCAAGAAATTGGATCCATGTATGGTATTCCAAAGGAGATGACCAAGCTCAATGGGAAACTGGGCACCATCAAGGCTGTGCTTTTGGATGCCGAGGAGAAGCAGCAGCAGCAGAGCAATCGTGCAGTCAAAGATTGGGTCCGGAGGTTCAGAGGTGTTGTTTATGACGCAGATGACTTGCTGGATGACTATGCAACCCATTATCTTCAGCGAGGAGGATTGGCAAGGCAGGTCAGTGACTTCTTCTCATCTGAAAATCAAGTTGCTTTTCGTTTTAAGATGAGTCATAGACTCGAGGATATCAAAGAAAGGCTAGATGATGTTGCAAACGACATCCCCATGTTAAATCTCATTCCACGGGACATAGTACTACACACACGGGAAGAGAATAGTGGGAGAGAAACCCACTCATTCTTGTTGCCGTCTGAAATTGTAGGAAGAGAAGAAAACAAAGAGGAGATAATAAGGAAGCTGTCATCTAACAATGAAGAAATTCTTTCCGTTGTTGCCATTGTTGGCTTTGGGGGATTGGGTAAGACCACCCTCACTCAATTGGTATACAATGACGAAAGAGTAAAACATTTTGAGCATAAGACATGGGTTTGCATTTCTGATGATTCTGGTGATGGTCTTGACGTCAAACTGTGGGTCAAAAAGATTTTAAAATCTATGGGAGTTCAGGATGTGGAGAGTCTGACCTTGGATGGTTTGAAAGACAAGCTTCACGAAAAAATAAGTCAAAAGAAGTACTTGTTAGTACTTGATGATGTTTGGAACGAAAATCCTGGAAAATGGTATGAAGTGAAAAAATTGTTGATGGTTGGTGCTAGAGGTAGTAAAATTATAGTAACCACCCGAAAACTTAATGTTGCATCCATTATGGAAGATAAGTCTCCCGTTAGTTTGAAAGGTCTAGGAGAAAAGGAGTCTTGGGCTTTATTTTCAAAATTTGCATTTACAGAACAGGAGATTTTGAAGCCAGAAATTGTAGAAATTGGAGAAGAAATTGCAAAAATGTGCAAGGGAGTTCCTCTCATTATTAAGACTTTAGCAATGATATTGCATTCTAAAAGAGAACTGGGATTGTGGTTGTCTATTAGAAACAATATTAAAAATTTGTTATCACTTGGAGATGAAAATGAGAATGTTCTACGGGTGTTGAAACTAAGGTGGTTAAGGAATCACAAAATTGGTAGCTTGAGTGAGTTGAAAAGCCTGAACCATCTAAGAGGAGGGTTATGCATACGAAATCTTCAAAACGTGAGGGATATTGAACTGGTATCCAAGGGAGAAATTTTGGAACGAAAACAATATCTTCAGTCCTTGAGATTGGAATGGAAACGGTCGGGCCAAGATGGGGGGGATGAGGGTGATAAGTCAATGATGGAAGGCCTTCAACCACACCCACACCTAAAGGATATCTTTATAGAAGGTTATGGAGGTACGGAGTTTCCAAGTTGGATGATGAATGATGGGTTGGGTTCCCTGCTTCCCTGCCTAATTAAAATTGAAATTTCGAGATGTTCAAGATGCAAAATTCTGCCACCCTTTTCTCAACTCCCTTCTCTCAAGTCTTTGAAGCTTCAAAACATGAAAGAAGTGGTGGAGTTGAATGAGGATTCATCAGCAACGCCACTCTTCCCATCTCTTGAATCGCTCGGACTCTTTAACATGCCAAAGTTGAAGGAATTGTGGAGGATGGACTTACTAGCAGAGGAAGTTCCTACATTTTCTCATCTTTCTCAATTAGAGATCAGAAATTGCCATAACTTGGCATCCTTGGAACTGCATTCATCTCCTTGTCTTTCTCAATTAAAGATCATCGATTGCCCTGGCTTCTTATCCTTGGAACTGCATTCATCTCCTTCTCTTTCTCGATTAACAATTGATGATTGCCCAAACTTGACATCCATGGAACTGCCGTCATCTCTTTGTCTTTCTCAATTAGATATCAGAAAGTGCCCTAACTTGGCATCCTTCAAAGTGGCTCCATTACCTTCTCTTGAGACACTATCTCTGTTTACAGTTAGATATGATGTGATACGGCAGATAATGTTTGTCTCTTCGTTGAGGTCTCTGTCTATTGGAAGCATAGATGATATGATATCTCTCCCAAAGGAGCTACTTCAACATGTTTCTGGCTTGGTAACGTTACAGATCCGTGAGTGTCCTAACTTGCAATCCTTGGAACTGCCCTCATCCCATTGTCTTTCTAAATTAAAGATCATAAAATGCCCTAACTTGGCATCCTTCAATGTGGCTTCATTACCTCGTCTTGAGGAACTAAGCCTGCGTGGAGTCAGTGCAGAGGTACTGAGGCAGTTAATGTTTGTCTCTGCTTCTTCTTCATTGAAGTCTCTGGGTATATGGGAGATTGATGGTATGATATCTCTCCCAGAGGAGCCGCTTCAATATGTTTCCACTCTCGAAACCCTCTACATTGTCAAGTGCTCTGGTTTGGCAACATTACTACACTGGATGGGCAGCCTTTCCTCACTTACGGAACTTATTATTTACAACTGCTCGGAATTGACATCACTGCCAGAAGAGATCTATTCCCTTGAAAAACTGCAGACATTTTATTTCTGTGATTATCCACACCTAGAGGAAAGATACAACAAGGAAACAGGTGAAGACCGGGCCAAGATTGATCATCTCCCACGTATTTATTTCGAAAAGGATTTTCCTATGAGATATAAGGTCCGAAATCCCTAA 2778 0.4122 MAGQIPFGVVEHILTKLGSKAFQEIGSMYGIPKEMTKLNGKLGTIKAVLLDAEEKQQQQSNRAVKDWVRRFRGVVYDADDLLDDYATHYLQRGGLARQVSDFFSSENQVAFRFKMSHRLEDIKERLDDVANDIPMLNLIPRDIVLHTREENSGRETHSFLLPSEIVGREENKEEIIRKLSSNNEEILSVVAIVGFGGLGKTTLTQLVYNDERVKHFEHKTWVCISDDSGDGLDVKLWVKKILKSMGVQDVESLTLDGLKDKLHEKISQKKYLLVLDDVWNENPGKWYEVKKLLMVGARGSKIIVTTRKLNVASIMEDKSPVSLKGLGEKESWALFSKFAFTEQEILKPEIVEIGEEIAKMCKGVPLIIKTLAMILHSKRELGLWLSIRNNIKNLLSLGDENENVLRVLKLRWLRNHKIGSLSELKSLNHLRGGLCIRNLQNVRDIELVSKGEILERKQYLQSLRLEWKRSGQDGGDEGDKSMMEGLQPHPHLKDIFIEGYGGTEFPSWMMNDGLGSLLPCLIKIEISRCSRCKILPPFSQLPSLKSLKLQNMKEVVELNEDSSATPLFPSLESLGLFNMPKLKELWRMDLLAEEVPTFSHLSQLEIRNCHNLASLELHSSPCLSQLKIIDCPGFLSLELHSSPSLSRLTIDDCPNLTSMELPSSLCLSQLDIRKCPNLASFKVAPLPSLETLSLFTVRYDVIRQIMFVSSLRSLSIGSIDDMISLPKELLQHVSGLVTLQIRECPNLQSLELPSSHCLSKLKIIKCPNLASFNVASLPRLEELSLRGVSAEVLRQLMFVSASSSLKSLGIWEIDGMISLPEEPLQYVSTLETLYIVKCSGLATLLHWMGSLSSLTELIIYNCSELTSLPEEIYSLEKLQTFYFCDYPHLEERYNKETGEDRAKIDHLPRIYFEKDFPMRYKVRNP* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1281 925 PRINTS Disease resistance protein signature 361 375 - -
Vvi19g1281 925 PRINTS Disease resistance protein signature 539 555 - -
Vvi19g1281 925 PRINTS Disease resistance protein signature 189 204 - -
Vvi19g1281 925 PRINTS Disease resistance protein signature 265 279 - -
Vvi19g1281 925 Pfam NB-ARC domain 168 409 IPR002182 GO:0043531
Vvi19g1281 925 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 774 881 IPR039203 GO:0050832
Vvi19g1281 925 Gene3D - 148 321 IPR027417 -
Vvi19g1281 925 Gene3D - 325 413 IPR042197 -
Vvi19g1281 925 SUPERFAMILY L domain-like 669 890 - -
Vvi19g1281 925 Gene3D - 9 120 - -
Vvi19g1281 925 SUPERFAMILY L domain-like 385 694 - -
Vvi19g1281 925 Pfam Rx N-terminal domain 9 104 IPR041118 -
Vvi19g1281 925 Gene3D Ribonuclease Inhibitor 474 699 IPR032675 -
Vvi19g1281 925 Gene3D Ribonuclease Inhibitor 751 898 IPR032675 -
Vvi19g1281 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 411 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1281 Vvi-Chr19 21634750 21638325 Proximal