Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g1280 | ATGGTTCTGTTTGGGATACCTGATATTTGGCTTTTCTGGTCAACTGATGAGCGGTTCACCTCTCAATTCTCAAAGGGCCAGCTTGGGGTCAAGTTCAAGCCATTTTCAAAGTATCCTCCTTGTTACAAGGACAAGAGTTTTTGGATTAATGAGTTGTTCACAGAAAACAATTTATGTGATGTTGTAAGAGGAGTTGCTGGAGATCTTGTCGAGGGGGTGCAATTGATCGACAATTTCACCAACAAGAAAGGAATGACCAGTCAATGTTATCGGATAGCATACCGGTCCATGGAGCGTTCACTTACAGATGAGGAGATAAACGAGTTGCAGTGGAATGTTAGGGAGCAAGTGCAGAGCAAGTTGAAGGTTGTTCTTAGATGA | 381 | 0.4278 | MVLFGIPDIWLFWSTDERFTSQFSKGQLGVKFKPFSKYPPCYKDKSFWINELFTENNLCDVVRGVAGDLVEGVQLIDNFTNKKGMTSQCYRIAYRSMERSLTDEEINELQWNVREQVQSKLKVVLR* | 127 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g1280 | 126 | FunFam | Phenylalanine--tRNA ligase chloroplastic/mitochondrial | 33 | 126 | - | - | |
| Vvi19g1280 | 126 | Pfam | Ferredoxin-fold anticodon binding domain | 36 | 126 | IPR005121 | - | |
| Vvi19g1280 | 126 | Gene3D | - | 33 | 125 | IPR036690 | - | |
| Vvi19g1280 | 126 | ProSiteProfiles | Ferredoxin-fold anticodon binding (FDX-ACB) domain profile. | 36 | 126 | IPR005121 | - | |
| Vvi19g1280 | 126 | Gene3D | Bira Bifunctional Protein; Domain 2 | 1 | 32 | IPR045864 | - | |
| Vvi19g1280 | 126 | SMART | FDX_ACB_2 | 36 | 126 | IPR005121 | - | |
| Vvi19g1280 | 126 | SUPERFAMILY | Anticodon-binding domain of PheRS | 31 | 126 | IPR036690 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi19g1280 | Vvi-Chr19 | 21600134 | 21602613 | Dispersed |