Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1269 ATGTTCTTGGTTCGCACCTCTGCTCAGCTATTGGCGCATGTGACTGGTTCGTCTACACATGGTGCCGTTGTGAAATATGGATTTGAGCATGAGCCACATGTTCAAAGTGGCTTGATTTACATGTACGCAGGATTGGGTGGTTTGGTTGCTTGCCATTGGATGTCTTCATCAATTTGTGAGCCAGATTTGGTGTGTCAGACTGCAATGGTCAGTGCATGTGCCAAGATAATTAACTATCGATATGATCCGTCTGAAAAGTGGTTGGTTTTGATTGGAATTGCTCCGGGTTCACCTGAGAGACCACAGCTTGTCAAAGGGAATATGCAGCTTTTCTCTGTTGAACAGCATCGAAGTCAAGCTCTTGAAACTCAGGCTGTATCATTCGCCACATTTAAAGTTCCAGGGAATGATCAATCCTATGCACTTATTGGTTTTGCCACAATATCCTTTAATGCCGGACAGATTGTCTCAAAGCTACATGTCATTGAACTTGGATCCAACTCAGGGGAACCAGGATTTATAGGGAAACAGGCTGATCTTTTCTTTCCCCCAGATTTTACTGATGATTTTCTAGCTGCAATGCAGATATCGCACAAATATGACTTTATACATGTGATTACCAAGCTTGGATTGTTGTTTGTTTATGACCTGGAGACGTCTTCTACAGTATACAGAAATAGGATTAGTCCAGATATCACTGCTCTTGAGGAGTCTCTTACTGCTGCTGGTGGGAAGTTCATCTTTGTGCAAAAGCTTCGTGACTTTGTTTCTGTTACATGTGACGTTTTGCAGCATAAGGCTTTTCTTTTTATTGAGGGACTTGAAGAGCAAATGCAGAAGCTTCATGAAGAGCGTGCATCAGCTGTCTTAGAAAGGAGAGCTGCTGATAATGATGAGATGATGGGAAACACAAGCATCCATTGA 924 0.4253 MFLVRTSAQLLAHVTGSSTHGAVVKYGFEHEPHVQSGLIYMYAGLGGLVACHWMSSSICEPDLVCQTAMVSACAKIINYRYDPSEKWLVLIGIAPGSPERPQLVKGNMQLFSVEQHRSQALETQAVSFATFKVPGNDQSYALIGFATISFNAGQIVSKLHVIELGSNSGEPGFIGKQADLFFPPDFTDDFLAAMQISHKYDFIHVITKLGLLFVYDLETSSTVYRNRISPDITALEESLTAAGGKFIFVQKLRDFVSVTCDVLQHKAFLFIEGLEEQMQKLHEERASAVLERRAADNDEMMGNTSIH* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1269 307 Coils Coil 271 291 - -
Vvi19g1269 307 PANTHER CLATHRIN HEAVY CHAIN RELATED 51 268 - -
Vvi19g1269 307 SUPERFAMILY Clathrin heavy-chain terminal domain 50 239 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vvi19g1269 307 Gene3D - 48 283 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vvi19g1269 307 Pfam Clathrin propeller repeat 72 114 IPR022365 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1269 Vvi-Chr19 21349044 21351449 Dispersed/Transposed