Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g1265 | ATGGGAAGTCTTGGAAAGTACTCCAATGAAGAACCTGTGGTTGGCATTAGTGTCAAGAACTGTACCTTCACCAACACCCAGAATGGCGTGAGAGTGAAGACATGGCCTGCTTCCCATCAAGGCACTGCCTTTGAAATGCATTTTGAAGATATTGCTATGAATAATGTTGGCAATCCCATAATCATAGATCAAGAGTACTGCCCCCATAACCAATGCAACTTGAAGATTCCATCACGCATTAAGCTCAACAATGTTAGCTTCAGAAACATCTGA | 273 | 0.4249 | MGSLGKYSNEEPVVGISVKNCTFTNTQNGVRVKTWPASHQGTAFEMHFEDIAMNNVGNPIIIDQEYCPHNQCNLKIPSRIKLNNVSFRNI* | 91 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g1265 | 90 | Pfam | Glycosyl hydrolases family 28 | 1 | 90 | IPR000743 | GO:0004650|GO:0005975 | |
| Vvi19g1265 | 90 | SUPERFAMILY | Pectin lyase-like | 1 | 90 | IPR011050 | - | |
| Vvi19g1265 | 90 | PANTHER | - | 1 | 90 | - | - | |
| Vvi19g1265 | 90 | Gene3D | - | 1 | 90 | IPR012334 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi19g1265 | Vvi-Chr19 | 21281602 | 21282236 | Proximal |