Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1257 ATGCTTACTTACTTCAGAGGGGCCACTGCTCGCCACCACCACTTCATGGCTGTGCCCATTTCACTTGCCCAAGCCACTCTCTTCTCCAAACCCTCCATTTTACTCCACAGAAATGCCATCAATGGCTTCTCCTTTTTCATTCCTTTCTCCTCTTCTTCTGCTCAGAAGATTCAGACTCACAAGTGGAGGCAACCGGTGGTCTCGGTTCTGGATCTTGGTGGAGTCAAGATTGGCAGAGATGATGTGGTGAGGGATGATCCTACAAACAATGTCCCGGATGCAATTTTTTTGAAACTTGGAATGCAGCTTCACAGGAGGGATCAACACCCAGTTGGAATTCTGAAGAATGCAATATATGATTATTTCAATGCCAATTACTCTAACAAATTTGATAAGTTGGATGACCTTTGCCCAATAGTCTCCACAAAAGAGAATTTTGATGATGTCTTGGTTCCTCCTGATCACGTCAGTAGAAGTTACAATGATACATACTACATTGACTCCCAAACTGTCTTGAGGTGCCACACTAGTGCTCATCTAGCAGAGCTATTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCCTAGAGATTCCATTGATTCAACTCACTACCCTGTTTTTCATCAGATGGAAGGTGTTCGTGTCTTCTTTCCAGGTGATTGGGAGACATCTGGAATGGATGGCACGTCTTATGCGGCTGAGGATTTAAAGAAATGTCTTGAGGGTTTGGTGCAGCACTTGTTTGGTAATGTGGAAATGCGCTGGATTGATACATATTTCCCTTTCACCAACCCATCATTTGAACTTGAGATATATTTTCAGGTATGCTTTTGA 846 0.435 MLTYFRGATARHHHFMAVPISLAQATLFSKPSILLHRNAINGFSFFIPFSSSSAQKIQTHKWRQPVVSVLDLGGVKIGRDDVVRDDPTNNVPDAIFLKLGMQLHRRDQHPVGILKNAIYDYFNANYSNKFDKLDDLCPIVSTKENFDDVLVPPDHVSRSYNDTYYIDSQTVLRCHTSAHLAELLRRGHTHFLVTGDVYPRDSIDSTHYPVFHQMEGVRVFFPGDWETSGMDGTSYAAEDLKKCLEGLVQHLFGNVEMRWIDTYFPFTNPSFELEIYFQVCF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1257 281 FunFam Phenylalanine--tRNA ligase chloroplastic/mitochondrial 74 228 - -
Vvi19g1257 281 Gene3D Bira Bifunctional Protein; Domain 2 226 279 IPR045864 -
Vvi19g1257 281 Gene3D Bira Bifunctional Protein; Domain 2 74 225 IPR045864 -
Vvi19g1257 281 Pfam tRNA synthetases class II core domain (F) 106 277 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Vvi19g1257 281 PANTHER PHENYLALANYL-TRNA SYNTHETASE 90 274 - -
Vvi19g1257 281 SUPERFAMILY Class II aaRS and biotin synthetases 98 280 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1257 Vvi-Chr19 21167540 21173705 Dispersed/Proximal