Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1254 ATGACACCAGGGAAAGGCCTATTCTTCAGAAAGACAGAGAACCGTGACACTGAAAATTTTGATGATGTCTTGGTTCCTCCTGATCACATCAGTAGGAGTTACAATGATACATACTACATTGACTCTCAAACTGTCTTGAGGTGCCACACTAGGGCTCATCAAGCAGAGCTGTTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCATAGAGATTTCATTGATTCAACTCACTACCTGTTTTTCATCAGATGGAAGGTGTTCGTGTCTTCTTTCCAGGTGATTGGGAGACATCTGGAATGGATGCACTTGTTTGGTAATGTAGAAATGCACTGGATTGATACATATTTCCCTTTCACCAACCCATCATTTGAACTTGAGATATATTGTCAGGAGAAATGGTTAGAAGTTTTAGGTTGTGGGGTGACAGAGCAAGAAATATTACAGAAAAGTGGTAAAACAGGTAATGTTGCTTGGGCTTTTGGGCTTGGATTGGAACGGCTAGCAATGGTTCTGTTTGGGATACCTGATATTCGGCTTTTCTGGTCAACTGATGAGCGGTTGACCTCTCAATTCTCAAAGGACCAGCTTGGGGTCAAGTTCAAGCCATTTTCAAAGTATCCTCCTTGTTACAAGGGCATGAGTTTTTGGATTAATGAGTCGTTCACAGAAAACAATTTATGTGAGGTTGTAAGAGGAGTTGCTGGAGATTTTGTCCAGGAGGTGCAATTGATCGACAATTTCACCAACAACAAAGGAATGACCAGTCAATGTTATCGGATAGCATACCGGTCCATGGAGCGTTCACTTACAGATGAGGAGATAAATGAGTTGCAGTGGAATGTTAGGGAGCAAGTGCACAGCAAGTTGAAGGTTGTTCTTAGATGA 897 0.4214 MTPGKGLFFRKTENRDTENFDDVLVPPDHISRSYNDTYYIDSQTVLRCHTRAHQAELLRRGHTHFLVTGDVYHRDFIDSTHYLFFIRWKVFVSSFQVIGRHLEWMHLFGNVEMHWIDTYFPFTNPSFELEIYCQEKWLEVLGCGVTEQEILQKSGKTGNVAWAFGLGLERLAMVLFGIPDIRLFWSTDERLTSQFSKDQLGVKFKPFSKYPPCYKGMSFWINESFTENNLCEVVRGVAGDFVQEVQLIDNFTNNKGMTSQCYRIAYRSMERSLTDEEINELQWNVREQVHSKLKVVLR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1254 298 PANTHER PHENYLALANYL-TRNA SYNTHETASE 18 196 - -
Vvi19g1254 298 Pfam Ferredoxin-fold anticodon binding domain 208 298 IPR005121 -
Vvi19g1254 298 Gene3D - 205 297 IPR036690 -
Vvi19g1254 298 SUPERFAMILY Anticodon-binding domain of PheRS 203 298 IPR036690 -
Vvi19g1254 298 SMART FDX_ACB_2 208 298 IPR005121 -
Vvi19g1254 298 Gene3D Bira Bifunctional Protein; Domain 2 97 204 IPR045864 -
Vvi19g1254 298 Gene3D Bira Bifunctional Protein; Domain 2 8 96 IPR045864 -
Vvi19g1254 298 SUPERFAMILY Class II aaRS and biotin synthetases 18 195 IPR045864 -
Vvi19g1254 298 ProSiteProfiles Ferredoxin-fold anticodon binding (FDX-ACB) domain profile. 208 298 IPR005121 -
Vvi19g1254 298 FunFam Phenylalanine--tRNA ligase chloroplastic/mitochondrial 205 298 - -
Vvi19g1254 298 Pfam tRNA synthetases class II core domain (F) 15 195 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1254 Vvi-Chr19 21097311 21108943 Dispersed/Proximal