Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1248 ATGGATATTTTTATTTCTAAAGAAAGTAATCTTTACATGGATTGGACCACTCCCACCTCCATCACAGCAAGCAGAAAATCCAACACTGATGTGGTGAGGGATGATCCTACAAACAATGTCCCGGATGCAATTTTTTCGAAACTTGGAATGCAGCTTCTTCACAGGAGGGATCAAAACCCAATTGGAATTGTGAAGAATGCAATATATGATTATTTCGATGCCAATTACTCAAACAAATTTGATAAGTTTGACGACCTTTGCCCAATAGTCTCCACAAAAGAGAATTTTGATGATGTCTTGGTTCCTCTTGATCACGTCAGTAGGAGTTACAATGATACATACTACATCGACTCTCAAACTGTCTTGAGGTGCCACACTACTGCTAATCAAGCAGAGCTGTTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCGTAGAGATTCCATTGATTCAACTCACTACCCTGTTTTTCATCAGATGGAAGGCGTTAGTGTCTTCTTTCCAGGTGATTGGGAGACATTTGGACTGGATGGCACGTCTTATGCGGCTGAGGATTTAAAGAAATGTCTTGAGGGTTTGGCGCAGCACTTGTTTGGTAATGTGGAAATGCGCTGGATTGATACATATTTCCCTTTCACCAACCCATCATTTGAACTTGAGATGTATTTTCAGGAGAAATGGTTGGAAGTTTTAGGTTGTGGGGTGACAGAGCAAGAAATATTAAAGAAAAGTGGGAAAACAGGTAATGTTGCTTGGGCTTTTGGGCTTGGATTGGAATGGCTAGCAATGGTTCTGTTTGGGATACCTGATATTCGGCTTTTCTGGTCAACTGGAGCGGTTCACCTCTCAATTCTCAAAGGGCCAGCTTGGGGTCAAGTTCAAGCCATTTTCAAAGTATCCTCCTCGTTACAAGGACATGAGTTTTTGGATTAA 945 0.4159 MDIFISKESNLYMDWTTPTSITASRKSNTDVVRDDPTNNVPDAIFSKLGMQLLHRRDQNPIGIVKNAIYDYFDANYSNKFDKFDDLCPIVSTKENFDDVLVPLDHVSRSYNDTYYIDSQTVLRCHTTANQAELLRRGHTHFLVTGDVYRRDSIDSTHYPVFHQMEGVSVFFPGDWETFGLDGTSYAAEDLKKCLEGLAQHLFGNVEMRWIDTYFPFTNPSFELEMYFQEKWLEVLGCGVTEQEILKKSGKTGNVAWAFGLGLEWLAMVLFGIPDIRLFWSTGAVHLSILKGPAWGQVQAIFKVSSSLQGHEFLD* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1248 314 Pfam tRNA synthetases class II core domain (F) 78 281 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Vvi19g1248 314 CDD PheRS_alpha_core 59 281 - -
Vvi19g1248 314 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 145 292 IPR006195 -
Vvi19g1248 314 Gene3D Bira Bifunctional Protein; Domain 2 176 289 IPR045864 -
Vvi19g1248 314 Gene3D Bira Bifunctional Protein; Domain 2 22 175 IPR045864 -
Vvi19g1248 314 PANTHER PHENYLALANYL-TRNA SYNTHETASE 30 279 - -
Vvi19g1248 314 FunFam Phenylalanine--tRNA ligase 23 291 - -
Vvi19g1248 314 SUPERFAMILY Class II aaRS and biotin synthetases 49 282 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1248 Vvi-Chr19 20987714 21002557 Proximal