Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1243 ATGGCTCCTAGCTTTGATGATGGCGACTCACTATACAACTTTGTGGTCAGAGATGGCAATGGTGTTAAAGGCATGGTGGACCTTGGTCTGGAGAAGGTGCCAGAGCAATACATTCAGCCACAGCATGAGCGCATAGACAAGCTCAAAGCAAGTTCCTATGATCGGCCGCCAATAGATTTATCAATGCTTGGCGGACCTCAGCATAGCCAAGTGATGGAGTTGATAGCCGAGGCAGCCGAGAGTGTGGGGTTCTTCCAAGTTGTGAACCATGGGGTGCCCAATGAAGTGCTGGAGTCGGTTAAGAGCGCGGCGCATGAGTTCTTTGGACAAGCTCCTGAGAAGAAGGCGGTGTATCGGAAGGGGGTGAGCCCGAGCCCGTACGTGAAGTATGGGACGAGCTTTGTGCCTGAGAAAGAGAAGGCATTGGAGTGGAAGGACTACGTTAGTATGGTGTATACGAGCGATGCCGATGCATTTGAATTTTGGCCTAATGAATGCAAGGAAGTAGCGCTAGAGTTCCTGAAGGCATCCATCTCAATGGTGAGAAGAATACTAGAAGTGTTAATGGAGAAGCTTGGAGTAACTCTAGATGAATCAAGAATCGATGGCCTCATTGGTTTAAAAATGGTGAACATGAACTTCTACCCCACCTGCCCTAACCCGGATCTCACCGTTGGCGTGGGACGCCACTCTGATATGGGCATGTTAACGGTGTTGCTACAAGATGGTATCGGCGGATTATACGTGAAAATGGAGGAAGACATCACAGGTGCTGGAAAGAAAGGAGAGTGGGTGGAGATACCACCCACACCAGGCGCATTGGTCATCAATGTTGGTGATACATTACAGATATTAAGCAATGGGAAGTACAAAAGCGCAGAACATAGGGTGCGTACCACAAGCACTCAATCCAGAGTGTCGATCCCTATATTCACCATTCCGAGACCAAATGAGAAGATCGGGCCATTGCCTCAAGTGGTTGAGAGAGATGGGGTTGCTCATTATCGCGAGGTTGTGGTTGAGGAGTACATGAACAACTTTTTTGGGAAAGCTCATGAAGGGAAGAAGTCACTAGATTTTGCTCAGATCAACTCCTCTTGA 1101 0.485 MAPSFDDGDSLYNFVVRDGNGVKGMVDLGLEKVPEQYIQPQHERIDKLKASSYDRPPIDLSMLGGPQHSQVMELIAEAAESVGFFQVVNHGVPNEVLESVKSAAHEFFGQAPEKKAVYRKGVSPSPYVKYGTSFVPEKEKALEWKDYVSMVYTSDADAFEFWPNECKEVALEFLKASISMVRRILEVLMEKLGVTLDESRIDGLIGLKMVNMNFYPTCPNPDLTVGVGRHSDMGMLTVLLQDGIGGLYVKMEEDITGAGKKGEWVEIPPTPGALVINVGDTLQILSNGKYKSAEHRVRTTSTQSRVSIPIFTIPRPNEKIGPLPQVVERDGVAHYREVVVEEYMNNFFGKAHEGKKSLDFAQINSS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1243 366 Gene3D - 11 345 IPR027443 -
Vvi19g1243 366 SUPERFAMILY Clavaminate synthase-like 21 354 - -
Vvi19g1243 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 314 IPR005123 -
Vvi19g1243 366 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 52 343 - -
Vvi19g1243 366 FunFam Feruloyl CoA ortho-hydroxylase 1 10 346 - -
Vvi19g1243 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 157 IPR026992 -
Vvi19g1243 366 Pfam 2OG-Fe(II) oxygenase superfamily 210 312 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1243 Vvi-Chr19 20817471 20819419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1243 21 363 Glycosyltransferase AT5G59530 34.278 5.04e-61 198