Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1236 ATGAAGGGTTTGGACACCAACATCTATGATGTGGTGTGCGTGTCGCCAAGGAACCACATGGTCTTCACTCATCTCTTGGCTTCTACTTGTGTTGGGACTCTTGAGTTCCGGTCCGTGGCTGAACCCATTGCGCAGATCCAGCCATTGATTTCAAGGGAAACTGGGTCCTACTTCTTTCTTGCTAATTGTAATCGGGTTGATCTCGATAACCATGTGAGGCTCCTACACTGTGTTGTTGTGGGAGGTGGTCCAATAGGAGTTGAGTTCAGTGGTGAACTTAGTGATTTTATCATGAGGAACGTTCATCAAAGATTTGCCCATGTGAAAAATTACATCCATGTTACTTTGATTGAGGCAAACGAGATATTGTCTTCCTTTGATGATCGCCTTCAGCACTATGCTACTAGGCAGTTGACTAAGTCAGGAGTTCGTCTTGTTCGTGGGATTGTTAAGGATGTTAAAGTTGACAAAATAATTCTAAATAATGGGACAGAGGTTCCATATGGGCTGTTGGTATGGTCTACACGTGTTGGTCCCTCTTCTTTTGTGAAGTCTATAGAGGTCCCAAAATCTCCTGGTGGAAGGATTGGCATCGATGAGTGGCTACGTGTTCCTTCTGCACAGGACATTTTTGCAATAGGTGACTGCAGTGGGTTCCTTGAAAGTACCGGCAAACCAGTTCTTCCAGCTCTAGCACAGGTTGCAGAGAGGCAAGGGAAGTATATAGCAAAACAATTGAACAGGATTGGCAAAGCTGGTGGAGGGTATGCAAACAAAGCAAGAGACAAGGAATTTAGAGAGCCCTTTATTTATAAGCATTTGGGAAGCATGACATTCCTTAGCAGATACAAGGCTCTTGTGGACCTTAGTGTCATAGGATGCTTCAAATGA 891 0.4433 MKGLDTNIYDVVCVSPRNHMVFTHLLASTCVGTLEFRSVAEPIAQIQPLISRETGSYFFLANCNRVDLDNHVRLLHCVVVGGGPIGVEFSGELSDFIMRNVHQRFAHVKNYIHVTLIEANEILSSFDDRLQHYATRQLTKSGVRLVRGIVKDVKVDKIILNNGTEVPYGLLVWSTRVGPSSFVKSIEVPKSPGGRIGIDEWLRVPSAQDIFAIGDCSGFLESTGKPVLPALAQVAERQGKYIAKQLNRIGKAGGGYANKARDKEFREPFIYKHLGSMTFLSRYKALVDLSVIGCFK* 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1236 296 Gene3D - 1 71 - -
Vvi19g1236 296 Gene3D - 72 295 - -
Vvi19g1236 296 PANTHER NADH DEHYDROGENASE 1 71 IPR045024 GO:0003954|GO:0006116
Vvi19g1236 296 Pfam Pyridine nucleotide-disulphide oxidoreductase 75 239 IPR023753 GO:0016491
Vvi19g1236 296 SUPERFAMILY FAD/NAD(P)-binding domain 76 245 IPR036188 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g1236 Vvi-Chr19 20535540 20536667 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1236 1 77 EF-hand Containing Proteins AT4G28220 37.662 3.74e-07 49.3