Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1234 ATGCTAGTTACGGTTTCAGGTCTTAGCAGTATGATCCTCGTAAATAAGAGAAGAGCGATGGAACTCTTCCCAGAAAGTGTGACAAAACTTTGGAATGAATGGGAACTCCGCGCATTGGTTTTGTTGAGCCTTTTCTTACAAATTGTGCTCATACTCTTGGGTAACAGGAGGAAATATATAGCTAGTAACTGGGTCAGAATCATCATTTGGCTAGCTTATTTAGCTGCAGATTGGATTGCAGCAGTCTGTATTGGCGTCCTGTCCAATGAGAATGGAGATGACAACTCATCACAACCAAACAGTTTGATATGGGCATTTTGGGCACCATTTCTGCTGCTGCACCTTGGCGGTCCGGATACTATTACAGCCTATTCATTAGAGGATAATGAATTATGGTTAAGACACTTTCTTGCGCTAGTCATCCAGTTTGGAGGGACATTTTACATTTTTCTTAGGTCCTGGAAGTCCAAACTGCTTAATATTCTGGCCATTCCAATTTTTGTGGCAGGACTCATCAAGTATGGGGAAAGGACCTGGGTTCTAAGGTCTGCAAGCAGTAAAACTTCTAGGACAGTGCATTCTCCTCCAGAAGGAGACATTTTGCAGCAGGCTTATTACTTCTTCGAAACTTTCAAGGTGGCTTTTGAAGTGGTTGAGATTGAGCTTGGATTCATGTACGATGTTCTCTACACAAAGGCAACTGTGACTTGCTCTAGATGGGGCAGCCTCCTCCGCTCGATTAGTTTGAGTTTCACCATTTCTGCATTCATAGCCTTCTTGACCATTGACAGGCAAGAGTACTCAACTATTGATGTGATTATAACGTACTTGTTGCTGGTTGGAGCTATTGTTCTAGAGATCTATGCCATTCTTGTACTGCTTTTCTCAGATTGGACTAAGCGGTGGTCAAAAATATCAAAGAGTGCCTCAGATATTGAGGCCGACTTCAGTCATAGCATTCTTCTCTGGCACATTGCAACTGATCTCTGCTATGAGAATGATGCAGAGAAGAATCCAGATTGTAAAGCGTGCAAGGTGCTTTCTGATTATATGTTGTATCTTCTGGTCATGTGCCCTTTCATGCTGCCTGACGGAATTGGGGAGATTAGATATCGAGACAGCTGCGCCGAGGCTAAAGAATTCTTCAAGGATAGAAAGCACATAAAAAGTAGAACCCAAGCTTGCAAAGATTTACTGAGACTGATGCGGGGTGTGTGGGTGGAGATGCTATGTTACGCTGCAAGTCAATGTCGGCCGAATCAGCATGCCAAGCAGCTCAGGCGAGGCGGAGAGCTGCTCACTCATGTCTGGCTTCTCATGGCTCATCTTGATGTAAGAGAAAATTTCCAGATTTCACAAGGCAATGCAAAAGGTGGGATAATTGTGAGCTAG 1392 0.4375 MLVTVSGLSSMILVNKRRAMELFPESVTKLWNEWELRALVLLSLFLQIVLILLGNRRKYIASNWVRIIIWLAYLAADWIAAVCIGVLSNENGDDNSSQPNSLIWAFWAPFLLLHLGGPDTITAYSLEDNELWLRHFLALVIQFGGTFYIFLRSWKSKLLNILAIPIFVAGLIKYGERTWVLRSASSKTSRTVHSPPEGDILQQAYYFFETFKVAFEVVEIELGFMYDVLYTKATVTCSRWGSLLRSISLSFTISAFIAFLTIDRQEYSTIDVIITYLLLVGAIVLEIYAILVLLFSDWTKRWSKISKSASDIEADFSHSILLWHIATDLCYENDAEKNPDCKACKVLSDYMLYLLVMCPFMLPDGIGEIRYRDSCAEAKEFFKDRKHIKSRTQACKDLLRLMRGVWVEMLCYAASQCRPNQHAKQLRRGGELLTHVWLLMAHLDVRENFQISQGNAKGGIIVS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1234 463 Pfam Protein of unknown function, DUF594 394 444 IPR007658 -
Vvi19g1234 463 PANTHER OS01G0798800 PROTEIN-RELATED 31 303 - -
Vvi19g1234 463 Pfam Domain of unknown function (DUF4220) 210 303 IPR025315 -
Vvi19g1234 463 Pfam Domain of unknown function (DUF4220) 70 191 IPR025315 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1234 Vvi-Chr19 20515117 20517286 Tandem