Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1182 ATGGAAGACGGTGTGTTTGAGGGTGGTGGGGCTGGTATTCATGAGGCTTCCAATCATCCGGATCTCAACCAATTTGGAGATACTTCCACAGTATTTGATGCTTCACAGTATGCATTTTTTGGTAAAGACGTCGTTGAGGAAGTTGAGTTGGGTGGATTAGAAGATGAAGATTTGCCTGTAGCTGGGTTTGATGAAGAGGAGTTCCTGTTAGACAGGGAGGAGGGTGAAGTTCTAAGGTCTTTATCTGATATTGATGATCTTGCTAGTACTTTTTCAAAGTTGGAAACAGGTGTTAGTGGACCAAGAAATGCAGGAATTATTGGTGATAGGGGATCCAGAGAAAGTTCTTCAGCTGCTGAATGGGCACAGGAAGAGGATCTACATTACTGGTTTGATCAACATATGTTTGAGACTGAAAGCCTTCAGGATGGCAAAAGATGGTCATCACAGCCCCATGCTTCTTCTGCCCATCTCTCAGAATTGAAGCCTCTGTACAGAACTTCATCATATCCTGAACAGCAGCAGCCACAGCAGCTCCAGCAGCATCAGCAGCAGCAGCATCACTACTCTAGCGAACCAATTCTAGTGCCAAAATCTTCTTTTACTTCTTATCCTCCCACAGGGGGCAGATCCCTGGAGGGTTCACCAAATCATCATTCACGCCACATCTCTCATCTTTCCGGCGGACCCCAGATTGCATTATCTCCATCAAACCTCCCTCCCTTTTCCAACCCTCAGCTTCAATTGCCCAGCTTGCATCATGGGTCCCAATTTGGTGGAAATTTACCTCAGTTTGCTCCTGGTCTCTCTGTTAATAGCCGACCACCAAGCCAATGGGTCAACCAAACCAACATATTTCCTGGAGATCATCCCAGTATCTTGAACAATTTGTTACAACAACAATTACCTCATCAAAATGGGCTAATGCCTCCACAGTTAATGCTGCAACAGCAGCCACAGCAGCATAGACTGCATCATCCAGTTCAGCCTTCATTTGGTCATTTATCAGGGCTGCAGTCCCAACTATTTAATCCCCATCTTTCCCCAGCTCCACCCATCATGAACAAATATGAAGCAATGCTTGGGATAGGTGATCTGAGGGATCAAAGACCCAAGTCAATGCAAAAAGGTAGACCGAATCATCGGTTTTCTCAACAGGGCTTTGATACTAGCAGTCAGAAGAGTGATGTTGGGTGGCCACAGTTCAGATCCAAGTATATGACAGCTGATGAAATCGAAAGTATCCTTAGAATGCAGCTTGCTGCAACACACAGTAATGATCCATATGTGGATGATTATTACCATCAGGCTTGTCTTGCAAAAAAATCTGCTGGAGCAAGATTGAAGCACCATTTCTGCCCAACTCACCTGAGGGAACTCCCTCCCCGAGCCCGTGCAAACAGTGAGCCACATGCTTTTCTCCAGGTTGATGCTCTTGGAAGGGTTCCATTCTCATCCATCCGCAGACCCCGTCCTCTTCTTGAAGTTGACCCTCCAAATTCATCTGTTGCTGGCAGCACTGAACAGAAAGTTTCTGAGAAGCCTCTGGAACAGGAACCGATGCTTGCAGCAAGAGTCACTATTGAGGATGGTCTTTGTCTTCTCCTTGATGTGGATGACATAGATCGGTTTTTACAATTCAATCAGCTCCAGGATGGTGGGACTCAGTTGAGGCGGAGACGGCAGAACCTGCTGGAAGGGCTCGCAGCATCACTTCAGTTGGTTGACCCACTTGGGAAACCTGGTCACACCGTTGGGCTGGCTCCCAAGGATGATCTTGTGTTCCTACGGTTAGTTTCACTTCCCAAAGGTAGGAAGCTTCTCTCAAAGTATCTCCAGCTACTCTTTCCAGCCGTTGAGCTCATCCGAATAGTCTGCATGGCCATTTTCCGCCATTTAAGGTTTTTATTTGGGGGCCTACCCTCTGATTCTGGAGCGGCTGAAACGACCACTAACCTCTCAAGGGTCGTTTCCTCATGTGTTCGTGGAATGGATCTCGGTGCTCTAAGTGCTTGTTTTGCAGCAGTGGTTTGTTCATCAGAGCAGCCTCCCCTTCGTCCTCTTGGAAGCTCTGCTGGTGATGGAGCTTCTGTAATACTAAAATCTGTGCTTGAACGGGCAACTGAAATTTTAACCGATCCTCATGTTGCTGGCAACTGCAATATGAATAATCGAGCCCTGTGGCAGGCCTCTTTTGACGAATTCTTTGGCCTTCTTACCAAGTACTGCTTGAACAAATATGATAGTATAATGCAGTCATTGCTCATGCAGGCCTCTTCAAACATGACAGCTGTGGGGGCAGATGCAGCTAGAGCCATCAGTAGAGAGATGCCAGTCGAGCTCTTGCGTGCAAGTCTTCCACATACCAATGAGCACCAGAAAAAGCTGTTACTGGATTTTGCACACCGCTCCATGCCTGTAATGGGATTTAATAGTCAGGGTGGCGGCAGTGGCAGTCATGTGAATTCTGAATCTGTTCTGAGTTGA 2487 0.4692 MEDGVFEGGGAGIHEASNHPDLNQFGDTSTVFDASQYAFFGKDVVEEVELGGLEDEDLPVAGFDEEEFLLDREEGEVLRSLSDIDDLASTFSKLETGVSGPRNAGIIGDRGSRESSSAAEWAQEEDLHYWFDQHMFETESLQDGKRWSSQPHASSAHLSELKPLYRTSSYPEQQQPQQLQQHQQQQHHYSSEPILVPKSSFTSYPPTGGRSLEGSPNHHSRHISHLSGGPQIALSPSNLPPFSNPQLQLPSLHHGSQFGGNLPQFAPGLSVNSRPPSQWVNQTNIFPGDHPSILNNLLQQQLPHQNGLMPPQLMLQQQPQQHRLHHPVQPSFGHLSGLQSQLFNPHLSPAPPIMNKYEAMLGIGDLRDQRPKSMQKGRPNHRFSQQGFDTSSQKSDVGWPQFRSKYMTADEIESILRMQLAATHSNDPYVDDYYHQACLAKKSAGARLKHHFCPTHLRELPPRARANSEPHAFLQVDALGRVPFSSIRRPRPLLEVDPPNSSVAGSTEQKVSEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLQFNQLQDGGTQLRRRRQNLLEGLAASLQLVDPLGKPGHTVGLAPKDDLVFLRLVSLPKGRKLLSKYLQLLFPAVELIRIVCMAIFRHLRFLFGGLPSDSGAAETTTNLSRVVSSCVRGMDLGALSACFAAVVCSSEQPPLRPLGSSAGDGASVILKSVLERATEILTDPHVAGNCNMNNRALWQASFDEFFGLLTKYCLNKYDSIMQSLLMQASSNMTAVGADAARAISREMPVELLRASLPHTNEHQKKLLLDFAHRSMPVMGFNSQGGGSGSHVNSESVLS* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1182 828 MobiDBLite consensus disorder prediction 371 396 - -
Vvi19g1182 828 MobiDBLite consensus disorder prediction 169 214 - -
Vvi19g1182 828 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 26 810 IPR039900 GO:0000290
Vvi19g1182 828 MobiDBLite consensus disorder prediction 378 396 - -
Vvi19g1182 828 MobiDBLite consensus disorder prediction 169 274 - -
Vvi19g1182 828 MobiDBLite consensus disorder prediction 491 516 - -
Vvi19g1182 828 MobiDBLite consensus disorder prediction 230 258 - -
Vvi19g1182 828 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1182 Vvi-Chr19 19442233 19461020 Dispersed