Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1170 ATGAAATATTCATGGAATGTGGTGAGTAAAGTGATGAGATTAGTGCCTCCTCTTCAAGGGACATTTAGAGAAGCCATTAAGGAATTCACGTATGAAGGTTTTACCATTCCAAAAGGATGGAAGGTATATTGGACAGTGAGCAACACAAACAAGAACCCAGCTTACTTTCCCAACTCAGAAAGCTTTGATCCGGTGAGGCTCGAAGAAGGAAACGGTGTGCAAACTCCATAG 231 0.4199 MKYSWNVVSKVMRLVPPLQGTFREAIKEFTYEGFTIPKGWKVYWTVSNTNKNPAYFPNSESFDPVRLEEGNGVQTP* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1170 76 Pfam Cytochrome P450 1 72 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1170 76 Gene3D Cytochrome P450 1 76 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1170 76 SUPERFAMILY Cytochrome P450 1 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1170 76 PRINTS B-class P450 signature 6 17 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1170 76 PRINTS B-class P450 signature 51 66 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1170 76 PRINTS B-class P450 signature 23 50 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1170 76 PANTHER CYTOCHROME P450 26 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1170 Vvi-Chr19 19093051 19093366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1170 1 42 Cytochrome P450 AT5G36110 71.429 2.07e-17 72.8