Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1161 ATGCTTGGGATAGGTGATCTGAGGAACCAAAGACCCAAGTCAATGCAAAAAGGTAGACCGAATCATGCTTGTCTCAATAGGGCTTTTATACTAGCAGTTAGAAGAGTGATGTTGGGTGGCCATAGTTCAGATCCAAGAATATTGACAGCTGATGAAATTGAAACTATCCTTAGAATGCAGCTTGCTGCAACGCACAGCAATGATCCATACATGGATGATTATTACTATCAGGCTTGTCTTGCAAAAAAATCTTCTCAAGCAAGGTTAAAGCACCATTTATGCCCAACTCACCTTAGGGAACTCCCACCCCGAGCCCGTGCAAACATTGAGCCACATGCTTTTCTCCAGGTTGATGCTCTTGAAAGGGTTCCATTGTCATCCATCCGCATACCCCGTCCTCTTCTTGAAGTTGACCCTCCAAAGTCATCTGTTGCTGGGCCCTGGAACAGGAATCGATGCTTGCAGCAAGGGTCGCCCTTGAGGATGGTCTTTGTCTTCTCCTTGATGTGGATGACACAGATCGATTTTTACAATTCAATTAGCTCCAAGATGGCGGGACCCGGTTGA 567 0.4586 MLGIGDLRNQRPKSMQKGRPNHACLNRAFILAVRRVMLGGHSSDPRILTADEIETILRMQLAATHSNDPYMDDYYYQACLAKKSSQARLKHHLCPTHLRELPPRARANIEPHAFLQVDALERVPLSSIRIPRPLLEVDPPKSSVAGPWNRNRCLQQGSPLRMVFVFSLMWMTQIDFYNSISSKMAGPG* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1161 188 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 1 146 IPR039900 GO:0000290
Vvi19g1161 188 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1161 Vvi-Chr19 18982768 18983334 Dispersed