Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1135 ATGGAAGAGAATTTAGGAAATAAAGAGCCTGTGACTACTTCTCCTTATGCGTTATTATCAAACTTGTATGCTTCAGATAGGAAGTGGGCAAATTTAAAGAACCTATCATTAGCAGGCAACAATTTCTTTGGCCCAACTACAGACTCAACTTCGAGGTTAGAATCAATCCAGTCTTTAGATTTCAGTTGCAACTCCTTTTCTGGTGATATGGCAGCATCATTGACTGTTGAGTCTGATATGGAATACAATTGGAATGCCAACATTGAGATATTTGGAAGAAGAGGTCCTGCTCCCGGAGTTAGACTTTGTGGGGTGCTTGGCGACTCACTTACCAGAGTTGCAAGAAAGCAAGCAGATGCACTTTTGTTTGCAGAGGCCAGAAAACAGAGTCTAGATTCTTTGAAAAGAGAAGATGACATTTTTGCTATAGAAGAGAAAAGATATGATGCTACTGGTGACAATGACAGGATTGTGGTGAATGATGGCAATATCCTATGGTGGGCACAGGTTCTGGAACCTGTTAGGGAGCTACCTACGAATGGGGAAATCAAAATTAGAAAGTGTATTTATGAGGTTCTGGAGAAGGATCCATCAGAATGGGTAAAGAAAATATTGGCGCGTTCAATCGGCAAGGAGAATGGATACTCAGACCAATGTTCTCCGCATGTACCTACAAGATGGCCAGATTATTCAGATTTACACAGCCATCCCTTTGGGCAAGAGAGTCACTTCTGGCTTTACAAAGATTGGTTCTTGGTGCAAGTGGTCTTGGTGCTCAAGTTGGTGATTGCTGGCTTCAATATGCAAAGCTCTGCCGCTCAGCTGGTTATTATGAGACAGCTAACCAAGCAATTCTGGAAGCTCAGGCTTCAGGGATGGCCAAAGGGTGCACAGAATGGACTTGGAATCGTTGCAAGTGTTCTGCTTGTTGTATGTGTCACCGCTATAAGTGATTATAGACAATCTTTGCAGTTCAAAGATTTGGACACAGAGAAGGAAAAGATTACAGCTCAAGTTACTAGAAGTGGACAGAGGCAAAAGATATCAGTATATGATCTAATTCCAGGATGGGTCATGCAAAATGCTTGTGACCACTGTTGGGATGAGAAGAGGATACAAATAGGTTTCTCATCATTACCAGATTCGACTTTACCACTGGTGAAATACCCTGCTGCATTTAATAATTATCCAATGTCACCTTCAGCCAAAATAGAGCAGCAGCCTTTGCAGACAGTTGTGAAGAGTAATGAACTGACTTTGAATGGTAAATCAGTTTTCCTAACAAGGGATATGAGTAGCAGCAATGGGGTCATGCAATTTTAG 1323 0.4172 MEENLGNKEPVTTSPYALLSNLYASDRKWANLKNLSLAGNNFFGPTTDSTSRLESIQSLDFSCNSFSGDMAASLTVESDMEYNWNANIEIFGRRGPAPGVRLCGVLGDSLTRVARKQADALLFAEARKQSLDSLKREDDIFAIEEKRYDATGDNDRIVVNDGNILWWAQVLEPVRELPTNGEIKIRKCIYEVLEKDPSEWVKKILARSIGKENGYSDQCSPHVPTRWPDYSDLHSHPFGQESHFWLYKDWFLVQVVLVLKLVIAGFNMQSSAAQLVIMRQLTKQFWKLRLQGWPKGAQNGLGIVASVLLVVCVTAISDYRQSLQFKDLDTEKEKITAQVTRSGQRQKISVYDLIPGWVMQNACDHCWDEKRIQIGFSSLPDSTLPLVKYPAAFNNYPMSPSAKIEQQPLQTVVKSNELTLNGKSVFLTRDMSSSNGVMQF* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1135 440 Gene3D Ribonuclease Inhibitor 10 89 IPR032675 -
Vvi19g1135 440 SUPERFAMILY L domain-like 27 70 - -
Vvi19g1135 440 PANTHER OS02G0192300 PROTEIN 103 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1135 Vvi-Chr19 18219094 18221860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1135 291 383 Primary Pumps ATPases AT2G22950 59.574 1.89e-26 110