Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1131 ATGAGGGGAATTCTGGAGACGTTTGCTGGCCATCAGACTGTTGGGAATCTTATCATATTTGCTCTCTTGAAAGACAGAACTGAAGGGAAAGAACTTTTGTTATCTGAAACTAGTTTGAATGTGAGAAGAGAGGAAAATAATGATGCAGATACAAGTGGCCAAATGTCTTTAAAATGCACTGTGAAAGATTCAGAAACAAAGGAAAATGCATTACACCAGAAGTCTAAGGCATCAGTGTTTACTTCGGGAATTGCTGCTATTGGAAGTTCATTATCTTTTCTAGGCAGTCAGTTGGGAGATAGTTTGCTTGTGCAATTTACTTCCATACCGTCTTCTAGTGTGGAGAAAAGGGTTGGAGATATTGAAGGTGATGTGCCTTCAGCAAAGCGATCGCGCAGGTCCTCTTCTGATGCTTTGCAAGATATGGTCAATGGTGATAAGCTGCCATTGTATGGTTCGGCTCCAAATAGCACAGAAACATCACAGAAGACATTTTCATTTTCAGTGAACGATTCACTCATCGATGTTGGTCCGTTGAAAGACTTCGCCTATGGTCTTCGAATTAATGCTGACCTAAAAGCAACTGGCATTGTTAAACAAAGTAATTTTGAACTGATGCGTTGTTCGGGTCATGGAAAGAATGGTGCTCTCTGTATTCTGCAGCAATCAATTCGTCCAGAAATGATCACTGAGGTTGAACTTCCTGGTTGCGAAAGAATTTGGACAGTTTATCACAAAAACACACGTGGTCATAATGCTGATTCTACCAAGATGATTACTAAGGATGATGAGTATTGTGCATACTTGATTATAAGCCCAGAATCTAGAACGATGGTACTAGAAACAGTTGAACTTCTCGGTGAAAATGACTTTGCTCTGTCTGTGGCAATGGATCTAGTTGCAAGTGTTTCTACCATAGAACAGACTTCTAAGGCCGCTTCTGTTAGTGTCATGCGTAAATTTCTGTATAAAATATCCGGGCAGAAATCAGCAATAATGGGCATTTTGAAAATGCTGAGATCGCTAGAATGCGCTGTTTAG 1041 0.4035 MRGILETFAGHQTVGNLIIFALLKDRTEGKELLLSETSLNVRREENNDADTSGQMSLKCTVKDSETKENALHQKSKASVFTSGIAAIGSSLSFLGSQLGDSLLVQFTSIPSSSVEKRVGDIEGDVPSAKRSRRSSSDALQDMVNGDKLPLYGSAPNSTETSQKTFSFSVNDSLIDVGPLKDFAYGLRINADLKATGIVKQSNFELMRCSGHGKNGALCILQQSIRPEMITEVELPGCERIWTVYHKNTRGHNADSTKMITKDDEYCAYLIISPESRTMVLETVELLGENDFALSVAMDLVASVSTIEQTSKAASVSVMRKFLYKISGQKSAIMGILKMLRSLECAV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1131 346 MobiDBLite consensus disorder prediction 117 139 - -
Vvi19g1131 346 Gene3D - 224 282 IPR015943 GO:0005515
Vvi19g1131 346 Gene3D - 80 175 IPR015943 GO:0005515
Vvi19g1131 346 Gene3D - 176 223 IPR015943 GO:0005515
Vvi19g1131 346 MobiDBLite consensus disorder prediction 117 136 - -
Vvi19g1131 346 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 73 285 - -
Vvi19g1131 346 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 81 283 IPR018846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1131 Vvi-Chr19 18097730 18098851 Dispersed