Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1122 ATGGCTTCTCCTGCAGCTGCAGCAGCTTCAACACCCAATATTAGTGCATGCGTTAAACCCAAATTATGCTATTCTTCTTCTTCTTCTTCCTCTTCCTCTTCAGCTCGTGATTTGGGCTCTTTCTCTTTCCATAGGCCCACCATAAGGCCCAACATAAACTGCTCTCTCCACTCCCCTTCTGTACTCCATTTCCCAAAGCACACATCATCAAGCACTGGCGTTGCTACTGTTAAAACCACGCTCCCAAAAGAGAAGGATGGCTTTTCTTCCTCTGTCTCACCGCAATGGAACTTTTTGCAAAGCGCTGCTGCCATGGCCTTGGATGCCGTGGAGACCGCGTTGGTAGCACGCGAGACCCAGCACCCTCTTCCCAAGACCGCAGACCCCAGAGTGCAAATCGCCGGTAATTTTGCTCCGGTACCTGAGCAGCCCGTCCATCACTCTCTCCCGGTGGATGGTCGAATCCCAGACTGCATTCAAGGCGTATACACTCGGAACGGCGCCAATCCCCTCCACAAGCCTGTCGCCGGCCACCATCTCTTCGACGGAGACGGCATGGTTCACGCTGTCCAATTCAAAGACGGCGATGCTAGCTACGCCTGCCGCTTCACCGAGACGCAGCGTCTGATCCAAGAGCGAGATTTCGGCCGGCCGGTGTTCCCCAAGGCCATCGGCGAGCTCCACGGCCACTCCGGCATCGCTCGCCTCCTCCTCTTCTACGCTCGCGGACTCTTCGGTCTGGTCGACCACAGTCACGGCACCGGCGTTGCCAACGCTGGGCTCGTCTATTTCAACCGTAGACTCCTCGCCATGTCGGAGGACGACTTGCCGTACCAAATCCGCGTGACCCCTTCCGGAGACCTGGAGACGGTGGGTCGCTACGACTTCGAGGGTCAGCTCCGTTCCACAATGATCGCTCACCCCAAAGTTGATCCAGTGTCTGGAGAGATGTTCGCTCTGAGCTATGATGTGGTCCAGAAGCCATACCTCAAGTACTTCCGCTTCTCCCCAAAGGGTGACAAATCCCCAGACGTGGAGATTCCACTGGCAGAGCCCACCATGATGCACGACTTCGCAATTACGGAGAGGTTCGTAGTGGTTCCAGATCAGCAGGTTGTGTTCAAGCTGCAAGAGATGATCAGCGGTGGCTCTCCTGTGGTCTACGAGAAGAACAAGATGTCGCGGTTCGGGGTGCTGGACAAGAATGCTACTGACGCTTCTGGTATGCGATGGATAGAGGCCCCTGATTGCTTCTGCTTCCATCTCTGGAACGCTTGGGAAGAGCCGGAGACCGATGAAGTCGTGGTGATTGGCTCCTGCATGACTCCACCCGACTCCATTTTCAACGAATGCGACGAAGGCCTCAAGAGCGTCCTCTCCGAAATCAGACTTAATCTGAAGACCGGAAAGTCCACACGCCGCCCTATACTTCCGGAATCGGAGCAAGTGAACTTGGAAGCCGGGATGGTGAACCGGAACCGCCTGGGAAGAAAAACCCAGTTCGCCTATCTGGCCGTGGCTGAGCCATGGCCCAAGGTGTCTGGTTTCGCCAAGGTTGACCTCTCAACTGGGCAAGTCAGCAAGTACATATATGGAGAGCAGAGGTATGGTGGTGAGCCTCTGTTCCTTCCAAGAGACCCCAACTCTGGCAGGGAAGATGATGGGTACATCCTGGCTTTTGTGCACGACGAGAAGACATGGAAATCAGAGCTGCAGATAGTGAACGCCACGAATTTACAGCTAGAAGCTTCTGTGAAACTTCCCTCACGAGTTCCCTATGGATTCCACGGCACCTTCATAAGCTCCAAGGAATTAGAGAAGCAAGCTTGA 1830 0.5481 MASPAAAAASTPNISACVKPKLCYSSSSSSSSSSARDLGSFSFHRPTIRPNINCSLHSPSVLHFPKHTSSSTGVATVKTTLPKEKDGFSSSVSPQWNFLQSAAAMALDAVETALVARETQHPLPKTADPRVQIAGNFAPVPEQPVHHSLPVDGRIPDCIQGVYTRNGANPLHKPVAGHHLFDGDGMVHAVQFKDGDASYACRFTETQRLIQERDFGRPVFPKAIGELHGHSGIARLLLFYARGLFGLVDHSHGTGVANAGLVYFNRRLLAMSEDDLPYQIRVTPSGDLETVGRYDFEGQLRSTMIAHPKVDPVSGEMFALSYDVVQKPYLKYFRFSPKGDKSPDVEIPLAEPTMMHDFAITERFVVVPDQQVVFKLQEMISGGSPVVYEKNKMSRFGVLDKNATDASGMRWIEAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFNECDEGLKSVLSEIRLNLKTGKSTRRPILPESEQVNLEAGMVNRNRLGRKTQFAYLAVAEPWPKVSGFAKVDLSTGQVSKYIYGEQRYGGEPLFLPRDPNSGREDDGYILAFVHDEKTWKSELQIVNATNLQLEASVKLPSRVPYGFHGTFISSKELEKQA* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1122 609 Pfam Retinal pigment epithelial membrane protein 138 600 IPR004294 GO:0016702
Vvi19g1122 609 PANTHER BETA-CAROTENE DIOXYGENASE 101 601 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1122 Vvi-Chr19 17645484 17647313 Dispersed