Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1117 ATGAAGCAATCCAAGGATCCATTTGAAGTGGCATTTGAGGAATCATCACCACCTGATTCACCTGTTGAGGAGATTGTTGGTGGACAAATCGAAGATGAAGATGATGCTAATGTCAATGTTCATCCCACATCAACACCCTCTGCTGCTCCATCTAGTGGAACCACGGTACCACCCACTGCAAAGTCCAAAGATGAAGATGAGGAAGAAGAGGAGGAGAACATGGATGTGGAGCTTGGAAAGCTCCCAACTTCTGGTGATCCTCATAAAATGGCCAAGATGCAGGCTATCTTATCACAGTTCACTGAGGAACAGATGAGCAGGTATGAATCCTTTAGGAGATCTGGATTTCAAAAAGCAAACATGAAAAAGTTGCTTGTGAGCATTACTGGAAGCCAAAAAATTTCAGCACCAATGACAATTGTAGCATCAGGAATAGCAAAAATGTTTGTTGGTGAGCTTGTTGAAACAGCTAGAATGGTTATGACTGAGAGAAAGGAAACAGGACCGATTAGGCCTTGCCACATTAGAGAAGCATATAGAAGATTAAAGCTTGAAGGCAAGGTGCCAAGGAGATCAGTGTCGCGCCTTTTCCGATAG 597 0.4338 MKQSKDPFEVAFEESSPPDSPVEEIVGGQIEDEDDANVNVHPTSTPSAAPSSGTTVPPTAKSKDEDEEEEEENMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQKANMKKLLVSITGSQKISAPMTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRSVSRLFR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1117 198 CDD TAF11 100 183 IPR006809 GO:0005634|GO:0006367
Vvi19g1117 198 FunFam Transcription initiation factor TFIID subunit 11 100 189 - -
Vvi19g1117 198 Gene3D Histone, subunit A 100 189 IPR009072 GO:0046982
Vvi19g1117 198 Pfam hTAFII28-like protein conserved region 96 181 IPR006809 GO:0005634|GO:0006367
Vvi19g1117 198 MobiDBLite consensus disorder prediction 39 59 - -
Vvi19g1117 198 SUPERFAMILY Histone-fold 100 189 IPR009072 GO:0046982
Vvi19g1117 198 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED 38 198 IPR045127 GO:0005669|GO:0006367|GO:0051123
Vvi19g1117 198 MobiDBLite consensus disorder prediction 1 88 - -