Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1111 ATGGATTCAAAGTTTGAACAACGCAGAGATAGAATCAGCAACCTACCAGATGCGCTTCTTTGTCACATCCTTTCATTTCTTCCCACTAAATTTGCTTTGGGAACTAGTATCCTGTCAAAAAGATGGAGGTACCTTTGGAAATCTGTCCCGATTCTCGACTTTGATGATGATTTACTGCTGAATCGAAATGCGGCCACGCCTGCTGAACTTGAAGAAAGAACAATTATGTTTTTGAATTTTGTGGACAGAGTATTGTTTCACAGTGATGTCTCATCTGTTCAAAAGTTCCGTCTCCTTTACTATGGTAGTCGTCTGGACTCTGTTTATTCGTGGATCTGCACTGCGCTTGGCCGTCGAGTTCAAGAGCTTGATCTCAACTTCCTTATGCTACACGGGGATATTGAATTGCCTCCCATGTTTTTCATTTCCAAAACATTAGTGGTTGTGAAACTCTGGCATGCGATCTTTCTTGATATCCCTTCTACAGTTTGGCTTCCAAGTCTCAAGATTCTCCATCTTAGGATGAGGTTTCAAGCGGACAACTTCTTTCTTCCTTGCCTTGCTAGGGTTTACTACTTTGCTATACAAAATATAACATTTGCATCATTTTCCCATGCAGTCACTCATGTGACTGATGATTATGATCTTCCTATATTTCATAACGTGACTTGTTTGGAGTTCTTACTTTTTGGCGACTTCGACTGGAACTTCTTGCCTGACTTTCTTCTTAGCTCACCTAATTTAGAATTTCTTGTAGTTAAAAATGTAAGTAAATATACAGTGTAA 786 0.3957 MDSKFEQRRDRISNLPDALLCHILSFLPTKFALGTSILSKRWRYLWKSVPILDFDDDLLLNRNAATPAELEERTIMFLNFVDRVLFHSDVSSVQKFRLLYYGSRLDSVYSWICTALGRRVQELDLNFLMLHGDIELPPMFFISKTLVVVKLWHAIFLDIPSTVWLPSLKILHLRMRFQADNFFLPCLARVYYFAIQNITFASFSHAVTHVTDDYDLPIFHNVTCLEFLLFGDFDWNFLPDFLLSSPNLEFLVVKNVSKYTV* 262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1111 261 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 213 254 - -
Vvi19g1111 261 SUPERFAMILY RNI-like 103 256 - -
Vvi19g1111 261 CDD F-box_AtFBL13-like 12 47 - -
Vvi19g1111 261 SMART fbox_2 15 55 IPR001810 GO:0005515
Vvi19g1111 261 Pfam F-box domain 12 50 IPR001810 GO:0005515
Vvi19g1111 261 SUPERFAMILY F-box domain 8 52 IPR036047 GO:0005515
Vvi19g1111 261 Gene3D - 2 50 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g1111 Vvi-Chr19 17241144 17243366 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1111 10 173 EF-hand Containing Proteins AT5G41840 38.202 2.79e-23 96.7