Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1108 ATGGTCTACCCACCCTCTGATAAAGTGTGGGCAGCAAACGGAGAAGAGGAAGAGGGGGGCAAGAAGGCATTCATAGACGGGATTAAGTTGTTGGAAGGAGAGCTTAAATCGAACCCTTACTTTGGGGGTGAGACCTTGGGTTTTCTGGACATTGCTTTTCTCCCATTGTACTACTGGTTCCATACATTCGAAACTTTTGGGAAGTTCAGCATAGAAGCGGAGTGTCCAAAACTGGTGGCATGGGGTGAGAGGAGTTCGTGTACGCCTCTCTACCACACCCACATAAGGTCTATGACATGGCGGTAG 306 0.4902 MVYPPSDKVWAANGEEEEGGKKAFIDGIKLLEGELKSNPYFGGETLGFLDIAFLPLYYWFHTFETFGKFSIEAECPKLVAWGERSSCTPLYHTHIRSMTWR* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1108 101 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 85 IPR045073 -
Vvi19g1108 101 CDD GST_C_Tau 1 89 IPR045074 GO:0004364|GO:0006749
Vvi19g1108 101 SUPERFAMILY GST C-terminal domain-like 2 92 IPR036282 -
Vvi19g1108 101 Gene3D - 1 98 - -
Vvi19g1108 101 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 101 IPR010987 -
Vvi19g1108 101 FunFam Uncharacterized protein 1 98 - -
Vvi19g1108 101 Pfam Glutathione S-transferase, C-terminal domain 21 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1108 Vvi-Chr19 17144702 17145136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1108 2 84 Glutathione S-transferase Gene Family AT1G17180 57.831 1.79e-29 103