Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1106 ATGGCAAACAATGACCAGATAGTTGTTTTAGATTTCTTGCCAAGCCCTTATGGGATGAGGGTAAGACTCGCCTTTGCAGCTAAAGGGATAGAGCATGAAGGGAAAGAAGAAGAAAACTTGATGGAGGGTAAAAGCTCTCTGCTCTTGCAGATGAACCCAGTTCATAAGAAAATTCCAGTTTTGATTCACAATGGGAAGCCCATATGCGAGTCCTTGATAATAGTGGAATACATTGATGGGCTTTGGAAGGATAAGTTTCCTCTTCTGCCATCTGATCCTTACCAAAGAGCTCAAGCCAAGTTCTGGGCTCACTTCATTGACAATAAGGTGGCGCTTCAATATCCTTCTTTCTTTTTGCTATTCCCACCTGACAGGAAACTATGGGCAGCCAAGAAAGAATTCATAGAAACTTTGAAGCTGTTGGAAGGAGAGCTTAAATCAAAACCTTATTTTGGGGGTGAGAAGTTGGGGTTTCTGGACATCGCTTTACTCCCACTGCACTGCTGGACCTACACGTTAGAGACTTTTGGGAACTTCAGCATTGAAGCAGAGTGTCCAAAGATAGTGACATGGGGTAAAAGGTGTATGGAGGAGGAGTTTGTGTCCAGCTCTCTTCCTCACCCACACAAAATCTATGAATCGGTGGTGGAGTTTAAGAAGAAAATGGGAATATAA 675 0.4311 MANNDQIVVLDFLPSPYGMRVRLAFAAKGIEHEGKEEENLMEGKSSLLLQMNPVHKKIPVLIHNGKPICESLIIVEYIDGLWKDKFPLLPSDPYQRAQAKFWAHFIDNKVALQYPSFFLLFPPDRKLWAAKKEFIETLKLLEGELKSKPYFGGEKLGFLDIALLPLHCWTYTLETFGNFSIEAECPKIVTWGKRCMEEEFVSSSLPHPHKIYESVVEFKKKMGI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1106 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 218 IPR010987 -
Vvi19g1106 224 SFLD Main (cytGST) 3 222 - -
Vvi19g1106 224 Gene3D Glutaredoxin 1 91 - -
Vvi19g1106 224 CDD GST_C_Tau 93 218 IPR045074 GO:0004364|GO:0006749
Vvi19g1106 224 SUPERFAMILY GST C-terminal domain-like 82 222 IPR036282 -
Vvi19g1106 224 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Vvi19g1106 224 FunFam Tau class glutathione S-transferase 1 91 - -
Vvi19g1106 224 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Vvi19g1106 224 Gene3D - 92 224 - -
Vvi19g1106 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Vvi19g1106 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 213 IPR045073 -
Vvi19g1106 224 Pfam Glutathione S-transferase, C-terminal domain 129 198 IPR004046 -
Vvi19g1106 224 SFLD Main.3: Omega- and Tau-like 3 222 IPR045073 -
Vvi19g1106 224 CDD GST_N_Tau 7 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1106 Vvi-Chr19 17114099 17114848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1106 5 224 Glutathione S-transferase Gene Family AT1G17180 56.109 1.67e-82 243