Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1105 ATGCAGTGGGTCTACCCACCCTCTGATAAAGTGTGGGCAGCAAACGGAGAAGAGGAAGAGGGGGGCAAGAAGGCATTCATAGACGGGATTAAGTTGTTGGAAGGGGAGCTTAAATCGAACCCTTACTTTGGGGGTGAGACCTTGGGTTTTCTGGACATTGCTTTTCTCCCATTGTACTACTGGTTCCATACATTCGAAACTTTTGGGAAGTTCAGCATAGAAGCGGAGTGTCCAGAACTGGTGGCATGGGGTGAGAGGTGCATGGGGGAGGAGTTCGTGTACGCCTCTCTACCACACCCACATAAGGTCTATGACATGGCGGTAGAGTACAAGAAGAAACTGGGGATATAG 351 0.4986 MQWVYPPSDKVWAANGEEEEGGKKAFIDGIKLLEGELKSNPYFGGETLGFLDIAFLPLYYWFHTFETFGKFSIEAECPELVAWGERCMGEEFVYASLPHPHKVYDMAVEYKKKLGI* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1105 116 FunFam Uncharacterized protein 3 99 - -
Vvi19g1105 116 CDD GST_C_Tau 4 110 IPR045074 GO:0004364|GO:0006749
Vvi19g1105 116 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 114 IPR010987 -
Vvi19g1105 116 Gene3D - 2 116 - -
Vvi19g1105 116 Pfam Glutathione S-transferase, C-terminal domain 23 83 - -
Vvi19g1105 116 SUPERFAMILY GST C-terminal domain-like 2 114 IPR036282 -
Vvi19g1105 116 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 105 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1105 Vvi-Chr19 17103973 17105373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1105 4 116 Glutathione S-transferase Gene Family AT1G17180 53.097 1.22e-37 125