Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1100 ATGGTACGATTCAGGGGTATTTTTGGAATTTCATTCTTAAGGATATACAATCTTGGGAGCAAGTTGATACGGTCAAAAAAAGAAAATCTGGAGATACCCAAGAAGGAATTCATAGAATGCCTTAAGCTGCTGGAAGGAGAGCTTGCAGACAAATCCTACTTCGGTGGTGTAAAGTTGGGATTAGTGGACATTGCTCTGGTGCCATTTTGTAGCAGTTTTTACGCATACGAGACCTTTGCCAACTTCAGCATAGAGGAAGAGTGTCCCAAACTGAACTTATGGGCTAAGAGGTGCATGGAAAAGGAGAGTGTGTCCTCTTCTCTCCCTCACCAGCAGAAGGTCTATGACTTTATTTTGCAGGTGAGAAGACAGTTTGGACTGGAGTAG 387 0.4315 MVRFRGIFGISFLRIYNLGSKLIRSKKENLEIPKKEFIECLKLLEGELADKSYFGGVKLGLVDIALVPFCSSFYAYETFANFSIEEECPKLNLWAKRCMEKESVSSSLPHQQKVYDFILQVRRQFGLE* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1100 128 FunFam Putative GST6 protein 1 128 - -
Vvi19g1100 128 CDD GST_C_Tau 15 120 IPR045074 GO:0004364|GO:0006749
Vvi19g1100 128 Gene3D - 8 128 - -
Vvi19g1100 128 SUPERFAMILY GST C-terminal domain-like 16 122 IPR036282 -
Vvi19g1100 128 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 26 116 IPR045073 -
Vvi19g1100 128 Pfam Glutathione S-transferase, C-terminal domain 34 97 - -
Vvi19g1100 128 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 117 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1100 Vvi-Chr19 16803108 16803919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1100 3 128 Miscellaneous Gene Families AT1G78360 48.438 4.52e-36 121