Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1099 ATGGCAGACGAGATTATTTTGCTGGACTTCTGGCCGAGCATGTTTGGTATGAAGGTCAGAATTGCACTAGCAGAGAAGGGTCTCAAATATGAATACAGAGATGAGGACTTGTTCAACAAGGGCCCTCTACTTCTAGAGATGAACCCAATTCATAAGAAAATCCCAGTGCTGATCCATAATGGTAAACCCATTTGTGAGTCTCAGATAATAGTTCAGTATATTGATGAGGTTTGGAAGGATAAATCTCCATTATTGCCCTCGGATCCATACCATAGAGCTCAAGCCAGGTTCTGGGCTGACTACATAGACAAGAAGCTACACCTTCTTGGGAAAAGGTTATGGAGAACCAAAGGAGAAGAGCAGGAGGCAAACAAGAAGGAGTACATTGAATGCCTTAAGCTATTGGAAGGAGAGCTAGGAGATAAGCCATATTTTGGTGGTGAAAATTTTGGTTTTGTGGATGTGAATCTTATGCCATATTTTAGTTGGCTTTATGTATTTGAGATCGCTGCTAACTTCAGTATAGAAGCTGAGTGCCCAAAGTTGATTACATGGGCTAAAAGGTGCATGGAAAAGGAGAGTGTGTCCACTTCTCTTCCTGATCGTCAGAAGCTTTATGACTTCTTTTTACAATTGAAGAAGTGGCATGGTATAGAGTAG 660 0.4136 MADEIILLDFWPSMFGMKVRIALAEKGLKYEYRDEDLFNKGPLLLEMNPIHKKIPVLIHNGKPICESQIIVQYIDEVWKDKSPLLPSDPYHRAQARFWADYIDKKLHLLGKRLWRTKGEEQEANKKEYIECLKLLEGELGDKPYFGGENFGFVDVNLMPYFSWLYVFEIAANFSIEAECPKLITWAKRCMEKESVSTSLPDRQKLYDFFLQLKKWHGIE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1099 219 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Vvi19g1099 219 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Vvi19g1099 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Vvi19g1099 219 Gene3D Glutaredoxin 1 87 - -
Vvi19g1099 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Vvi19g1099 219 CDD GST_N_Tau 5 78 - -
Vvi19g1099 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Vvi19g1099 219 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi19g1099 219 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Vvi19g1099 219 Gene3D - 88 219 - -
Vvi19g1099 219 Pfam Glutathione S-transferase, C-terminal domain 116 192 IPR004046 -
Vvi19g1099 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vvi19g1099 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi19g1099 219 FunFam Glutathione S-transferase U20 88 219 - -
Vvi19g1099 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1099 Vvi-Chr19 16771499 16777158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1099 1 219 Glutathione S-transferase Gene Family AT1G17180 64.840 8.66e-109 310